Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1502 ATGGCAAATAACACTCATGTACCCTCTCTTTCCCAAACTTCTGATGAAGCCAACTCCTCTAACCATAGCCCAAGAAGCTTTGCCACCTTCCCTGGTGGTGGCGGAAGTGGTGGTGCAATAGGACAACCCTCCCTCTCTAACCAATTCAACAACAACCACAACAACAATAACCTACCACCACCATCTGATACTACTTCCAACTACTATCTCCTCCAAAGAGAGAACAACATGAACAACAACCAACCACAACAAGGGTTGGTAACAGTAACACCTTCAAAGAGACCTAGGGGAAGACCATCTGGGTCTAAGAATAAGCCCAAAACACCCATTATTATCAGACAAGAAAGTGAAAATGCTTTGAGATCAGTTGTTATTGAAATTCCTATAGGAAAAGATGTGATTGAGGGTCTCATCAACTTTGCTCGTCATCATCGTGTTGATATCTCAGTCCTTAGTGGATCTGGTTCTGTCACTGACATTTCCCTTCGTCACCATGTGTCATGTGCATCAATTTTCCCTTTTCATGGAACCTTTCGTATATTATCCTTAACCGGATCTTACATTGGTGTTCGTTTTCCTTCATTGGCAACACCTAATCACACTTCTTTTCCTCCTTGTTCTTCCTTTGGAATCAGTGTTGCAGGGCCTCAGGGACAAGTGTTTGGTGGTGTTATTGGAGGGAGAGTTATGGCAGCTAGTGTTGTGGTGGTGATGGCCATTGTTTTCAAGAAACCTGAGTTTCATAGGCTTTCATTGATCAATGAAAATGTTGTTGATGAAGGTGATGAAGAAGGTGAGAAAGAGAATGATGAGAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATGGATATGCTAGTATAATTAATGCTAGCCATTCAGGTGGTGTTCCTAACAGCAACATCAACAACAATGGGATTCTAATGATGCCAAACATGTCTGCTTTTGGTGTTTCTAATTCAGTTGGCCAATTGAATAGGCAAATGCATGTTGCCAACATGAACATGTTGCAGTGGAACCACCTCAATCATCTGCAGTAA 1062 0.3992 MANNTHVPSLSQTSDEANSSNHSPRSFATFPGGGGSGGAIGQPSLSNQFNNNHNNNNLPPPSDTTSNYYLLQRENNMNNNQPQQGLVTVTPSKRPRGRPSGSKNKPKTPIIIRQESENALRSVVIEIPIGKDVIEGLINFARHHRVDISVLSGSGSVTDISLRHHVSCASIFPFHGTFRILSLTGSYIGVRFPSLATPNHTSFPPCSSFGISVAGPQGQVFGGVIGGRVMAASVVVVMAIVFKKPEFHRLSLINENVVDEGDEEGEKENDENNNNNNNNNNNNNNNNNNNGYASIINASHSGGVPNSNINNNGILMMPNMSAFGVSNSVGQLNRQMHVANMNMLQWNHLNHLQ 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1502 353 MobiDBLite consensus disorder prediction 260 294 - -
Lal18g1502 353 MobiDBLite consensus disorder prediction 1 110 - -
Lal18g1502 353 Gene3D - 120 264 - -
Lal18g1502 353 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 46 307 - -
Lal18g1502 353 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 46 307 IPR014476 GO:0003680
Lal18g1502 353 MobiDBLite consensus disorder prediction 40 90 - -
Lal18g1502 353 MobiDBLite consensus disorder prediction 1 27 - -
Lal18g1502 353 Pfam Plants and Prokaryotes Conserved (PCC) domain 121 243 IPR005175 -
Lal18g1502 353 ProSiteProfiles PPC domain profile profile. 117 264 IPR005175 -
Lal18g1502 353 MobiDBLite consensus disorder prediction 272 294 - -
Lal18g1502 353 CDD DUF296 121 227 IPR005175 -
Lal18g1502 353 SUPERFAMILY AF0104/ALDC/Ptd012-like 118 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1502 Lal-Chr18 16877165 16878226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1502 88 303 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 34.498 1.16e-37 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1502 - - lang:109328424 508.834