Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1492 ATGGAACATAGAAGAAGCTGTTCTGATTTTATGTTCTTAGGTCTCATCCTCCTCTTATGTTTCTTTGGATCTGTTGAAAGTTACAAGAATTATACAGTTGGAGATTCTTTTGGTTGGTTTGATAATACTATGAACCCTGATATCAATTACCAGAAGTGGGTTACTAATAAAGATTTCACCTTGGGAGATTTCCTTATTTTCAACACAGACAACAACCACTCTATAGTACAAACATACAATTTTAGCACCTACAAAGAATGTGACTATGATGATGCTGAAGACAAGGACACAGTACAATGGTCAGCATCTGATCCATCAAATACTGAGACACATGATGTATCTGTAGCAGTTCCTTTAGTGAAAGAAGGAGTAACATACTTTTTTTCTAGTGACTATGATGGTGACCAATGCAAAAATGGACAACACTTCAAAATAAATGTTACTTATGGTCAAGGATTGCCTAAAAGTCTCAAAGATTCATCAGATTCTACATCTCCTATTAGTAGTCCAGTTTCTGGGGGTGAAGACTCAGCACCAGATACAATTGTTCCTTCCAATTTCAGCCATCCAAAGGAAAATAGTGATGATGATGATGATGATCATGAAAATGCTAGTGATGACAAAGCCAAAGAGAAATCTAGTTCTGTTTCAATGTTAATAGACAGTGGCAGTGGCAAAGCAATCGTAGGTATAATGGATGAATCTGAATTTGAACGTCTTCTCCAACTTTTCCCCGTTGTCCGTTCTCGCCATTACTGTGTAGAATCAGCATCGTCATCATCCAGACAAATAGCTTCTGGGTCTGCACAATATGAGGTAAAGGAATGGCATGATGCATGGGATGAAAGGGATAATGATTTTGAGAATCAAGGAATTAACCAACATGATTCATTTTGGAGCAAGCTAAAGTCAGAGGCTGCTGGGAAGGTGGGCGCAGAAGAAGCAGAGAGATTTTGCAAGGCATTCCAACAAATTCATAAGAAACTAGTCTATGAAGAGTTAAGTTTAGATGCTGCCAGAAGTTTCATAAACTCATCCTAG 1041 0.3794 MEHRRSCSDFMFLGLILLLCFFGSVESYKNYTVGDSFGWFDNTMNPDINYQKWVTNKDFTLGDFLIFNTDNNHSIVQTYNFSTYKECDYDDAEDKDTVQWSASDPSNTETHDVSVAVPLVKEGVTYFFSSDYDGDQCKNGQHFKINVTYGQGLPKSLKDSSDSTSPISSPVSGGEDSAPDTIVPSNFSHPKENSDDDDDDHENASDDKAKEKSSSVSMLIDSGSGKAIVGIMDESEFERLLQLFPVVRSRHYCVESASSSSRQIASGSAQYEVKEWHDAWDERDNDFENQGINQHDSFWSKLKSEAAGKVGAEEAERFCKAFQQIHKKLVYEELSLDAARSFINSS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1492 346 Pfam Plastocyanin-like domain 43 141 IPR003245 GO:0009055
Lal18g1492 346 Gene3D - 28 152 IPR008972 -
Lal18g1492 346 MobiDBLite consensus disorder prediction 154 217 - -
Lal18g1492 346 SUPERFAMILY Cupredoxins 29 147 IPR008972 -
Lal18g1492 346 ProSiteProfiles Phytocyanin domain profile. 29 149 IPR003245 GO:0009055
Lal18g1492 346 PANTHER BLUE COPPER PROTEIN 12 216 IPR039391 GO:0009055
Lal18g1492 346 MobiDBLite consensus disorder prediction 154 189 - -
Lal18g1492 346 PANTHER BNAA08G26900D PROTEIN 12 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1492 Lal-Chr18 16813036 16818544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1492 6 201 Phytocyanin Superfamily AT1G08500 57.286 4.18e-75 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1492 - - gmx:100499721 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1492 18 16813036 16818544 Lal18g1492 18 16813036 16818544 ECH