Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1490 ATGGCTTCTATACTTGATTCTGATGCTCTTGCTCAACCACAGCAACAACCTAAACGTGAGAATAAACAAAAGAATGAAGGAAGAAATAGGAGGGTACTTAAGGACATTGGTAACCTTGCTGTTAAGCAATCAGACCTTGTTCCTAATGTCCCTAAGCGCATCACAAGGAACCTTGGTGCTAAATTGTTGCCTAATGCCCAAGCAGCAGCAGAGAAAAACAAGAAGCCAAGCACTGATGTAGGAAATTTTGTTGCTGCAACAAAGGTGGAACAAGCTAAAAAGCCAACAGAAACTGAGGTTATTATCATAAGCTCTGATGATGAAGAGGAAGAAAAGGAGAAGCAAGCTGTTAAAGGAGGAAGAAAGGAAATAGAGAGGGTTGCTGCTAGGGGAAAGAACAGCAAGGCCTTCAGTTCAGTCCTATCAGCTAGAAGCAAGGCTGCTTGTGGACTTACTCACAAGCCAAAGGATTTGGTAGAGGACATTGATGTTGCTGACATTGCCAATGAATTAGCAGCAGTAGAGTACCTTGATGACATTTACATGTTCTACAAACTAACTGAGGATGATGGTTGTGTGCATGATTACATGCCTTCACAGCCAGATATCAACATGAAGATGCGATCAATACTGTTTGATTGGTTGATAGAAGTACATAGGAAATTTGAACTCATGCCAGAGACTCTCTATTTAACACTGAATATCATAGACAGATTCCTATCCATGAAGGCTGTACCTAGAAGGGAACTTCAATTAGTTGGTATCAGTTCAATGCTGATAGCATGCAAATATGAAGAGATATGGGCACCAGAGGTTAATGACTTTGTATACATAGTTGACAATGAATATGTTAGAGAACACATTCTCATCATGGAGAAAACAATCTTGAGTAAGCTTGAATGGTATCTAACTGTTCCAACACCTTATGTCTTCCTGGTTCGGTATATCAAAGCCTCTACTCCTTCTGATGAAGAGATGGAGAACATGGTGTTTTTCCTCGCTGAGCTTAGTTTGGTGGATTACTCTACAATGATCAAGTACTGTCCTTCTTTGATTGCTGCTTCTGCTGTGTATGCTGCAAGATGTACCCTTGGAAGGTGCCCTTATTGGACTGAGACTCTGAAACACTATACAGGCTATTCTGAGGAACAACTAAGGGATTGTTCCAAAATCATGGTCAACTGTCATTCTGTTGCTCCAGAAAGTAAGCTTAGGGCTGTTTACAAGAAATATAGTAGCTCTGAGCGCAGTGCTGTTGCTCTTGTTACTCCAGCAAAAAACCTGTTAGCAACAACACCACAGTCTTGA 1308 0.4098 MASILDSDALAQPQQQPKRENKQKNEGRNRRVLKDIGNLAVKQSDLVPNVPKRITRNLGAKLLPNAQAAAEKNKKPSTDVGNFVAATKVEQAKKPTETEVIIISSDDEEEEKEKQAVKGGRKEIERVAARGKNSKAFSSVLSARSKAACGLTHKPKDLVEDIDVADIANELAAVEYLDDIYMFYKLTEDDGCVHDYMPSQPDINMKMRSILFDWLIEVHRKFELMPETLYLTLNIIDRFLSMKAVPRRELQLVGISSMLIACKYEEIWAPEVNDFVYIVDNEYVREHILIMEKTILSKLEWYLTVPTPYVFLVRYIKASTPSDEEMENMVFFLAELSLVDYSTMIKYCPSLIAASAVYAARCTLGRCPYWTETLKHYTGYSEEQLRDCSKIMVNCHSVAPESKLRAVYKKYSSSERSAVALVTPAKNLLATTPQS 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1490 435 CDD CYCLIN 304 393 IPR013763 -
Lal18g1490 435 Gene3D - 193 304 - -
Lal18g1490 435 SUPERFAMILY Cyclin-like 307 427 IPR036915 -
Lal18g1490 435 CDD CYCLIN 207 296 IPR013763 -
Lal18g1490 435 Pfam Cyclin, C-terminal domain 306 423 IPR004367 -
Lal18g1490 435 PIRSF Cyclin_A_B_D_E 3 435 IPR039361 -
Lal18g1490 435 SMART cyclin_7 213 297 IPR013763 -
Lal18g1490 435 SMART cyclin_7 310 394 IPR013763 -
Lal18g1490 435 SUPERFAMILY Cyclin-like 169 303 IPR036915 -
Lal18g1490 435 SMART Cyclin_C_2 306 425 IPR004367 -
Lal18g1490 435 Pfam Cyclin, N-terminal domain 179 303 IPR006671 -
Lal18g1490 435 Gene3D - 179 420 - -
Lal18g1490 435 PANTHER CYCLINS 22 427 IPR039361 -
Lal18g1490 435 MobiDBLite consensus disorder prediction 19 34 - -
Lal18g1490 435 ProSitePatterns Cyclins signature. 208 239 IPR006671 -
Lal18g1490 435 PANTHER CYCLIN-B1-4 22 427 - -
Lal18g1490 435 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1490 Lal-Chr18 16805039 16808711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1490 44 422 Core Cell Cycle Gene Families AT2G26760 52.564 8.44e-139 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1490 K21777 - gmx:547782 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1490 18 16805039 16808711 Lal6g0151 6 1086047 1089143 LSH