Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1467 ATGGGGATTCAGACTATGGGTTCTCAAAGTAACGGGCAGCAGTCTCATTCACACCCTTCTCAGTTAGGTAGACAAAACTCGTGGTATAGTCTCACACTCAATGAGGTTAAAAGTCAACTAGGATACATAGGAAAGCCATTGGGGAGCATGAACCTCGATGAACTTCTTCAAAATGTATGGACCGCTGAAGCGAATGAGGTTGCAAGGGTAGAGAATGAGCAAATGTCGTCATCGTCTTCTCTTCAACGCCAGGCCAGTATGACCTTGGCTCATGCTTTAAGTGGGAAGACAGTTGATGATGTATGGAGAGAAATCCAGCAAGGCCAGCAGAAACGATATGGAAATGGCATGAAGACTGAGGATAAAGAAACGACTTATGGTGAATTGACTTTAGAGGACTTCTTAGTACAAGCAGGGCTTTTTGCTGAAGCTTCTGTAAGTCCGACGACAGGGTTGAATACAATGGATTCCTCTACTCCTCAAAGTTTACAACAAATGACAGGCTTGTCACCCTCCCCTTCAATTAGCAGTTTATCAGACACTAAACCAGGTCGCAAAAGGGATGCTCCAGATGCATATGAGAAAGCTCTTGAAAGGAGGATGAGGAGGAAAATCAAGAATAGGGAATCTGCTGCCCGCTCACGGGCAAGAAAACAGGCATACCATAATGAACTGGTTAGCAAGGTTTCTAGGCTAGAAGAAGAAAATATAAAGCTCAAAAAGGAGAAGGAGTTCGAGCAGCTACTACCATCTGAACCATCACCTGAACCAAAATATCAGCTGCGGAGAACAAGTTCCGCCTCCTTCTGA 810 0.4457 MGIQTMGSQSNGQQSHSHPSQLGRQNSWYSLTLNEVKSQLGYIGKPLGSMNLDELLQNVWTAEANEVARVENEQMSSSSSLQRQASMTLAHALSGKTVDDVWREIQQGQQKRYGNGMKTEDKETTYGELTLEDFLVQAGLFAEASVSPTTGLNTMDSSTPQSLQQMTGLSPSPSISSLSDTKPGRKRDAPDAYEKALERRMRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENIKLKKEKEFEQLLPSEPSPEPKYQLRRTSSASF 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1467 269 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 202 217 IPR004827 GO:0003700|GO:0006355
Lal18g1467 269 Gene3D - 197 249 - -
Lal18g1467 269 SUPERFAMILY Leucine zipper domain 199 244 IPR046347 GO:0003700|GO:0006355
Lal18g1467 269 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 197 242 IPR004827 GO:0003700|GO:0006355
Lal18g1467 269 MobiDBLite consensus disorder prediction 148 221 - -
Lal18g1467 269 PANTHER BZIP TRANSCRIPTION FACTOR 42 267 - -
Lal18g1467 269 MobiDBLite consensus disorder prediction 1 23 - -
Lal18g1467 269 Coils Coil 222 249 - -
Lal18g1467 269 MobiDBLite consensus disorder prediction 246 269 - -
Lal18g1467 269 MobiDBLite consensus disorder prediction 148 180 - -
Lal18g1467 269 SMART brlzneu 195 267 IPR004827 GO:0003700|GO:0006355
Lal18g1467 269 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 42 267 IPR043452 GO:0003700|GO:0045893
Lal18g1467 269 Pfam bZIP transcription factor 199 243 IPR004827 GO:0003700|GO:0006355
Lal18g1467 269 MobiDBLite consensus disorder prediction 181 205 - -
Lal18g1467 269 CDD bZIP_plant_BZIP46 199 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1467 Lal-Chr18 16651433 16660618 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1467 22 269 bZIP Transcription Factor Family AT3G56850 47.552 1.82e-67 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal18g1467 bZIP_1 8.2e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1467 K14432 - gmx:100798549 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1467 18 16651433 16660618 Lal18g1467 18 16651433 16660618 ECH