Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1465 ATGGTCCACCTTTTAGAATCCCGTCTTCCGGACATGGATTTGTTTGAGACAAATGGTAATGGAAACGGTAATGATGCTGAGGACTCCCTTCCTCCACCACCTCCTGTTGTGCCACTAGACGTTGTGCCAGTCAAAGCTGACCTAGAGCTCCCACCACCTGAACCTATTAAGAAAAAGCCTTCTAAGGTTCCAATGGCCAGACGTGGTACTGGATCAAAGGGAACTAAGCTGCAACTTCTCACTAATCACTTCAAAGTGAATGTGAACAACAATGATGGACATTTCTTCCAGTATAGTGTTTCCCTTGCATATGAAGATGGACGCCCTGTTGAAGGCAAGGGTGTGGGGAGAAAAGTTCTTGATAAGGTGCATGAGACTTATGCTTCTGAGTTAAATGGAAAGGACTTCGCTTATGACGGGGAGAAAACTCTGTTTACCGTTGGTTCTCTTGCTCGAAACAAGCTTGAGTTTCAAGTTGTGCTGGAGGATGTTACCTCAAACAGAAACAATGGAAATTGCAGTCCTGAACATGGAAGTCCAAATGAGACTGACAAGAAGAGGGTGCGACGCCCCTATCGTGCCAAGACATTCAAAGTCGAGCTAAGTTTTGCTTCGAAGATTCCAATGCAGGCCATTTCCAATGCCCTGCGTGGGCAGGAATCTGAGAATTTCCAAGAAGCCATAAGGGTGCTTGATATCATATTGAGGCAACATGCTGCTAAGCAAGGCTGCCTACTTGTGCGGCAGTCATATTTTCACAATGATCCCAAGAATTTTGCGGATGTGGGAGGCGGTGTCCTTGGATGCAGAGGTTTCCATTCTAGTTTCAGAACTACACAAAGTGGCCTGTCTCTGAATATAGACGTCTCTACAACAATGATTATTACTCCTGGGCCTGTGGTCGACTTCTTAATTGCTAACCAGAATGTGAGAGATCCCTTTTCACTTGACTGGGCAAAGGCCAAAAGAACTCTGAAAAATCTAAGGATCAAAACTAGCCCATCCAATCAGGAGTTCAAGATTACTGGGCTCAGTGAACTCCCCTGCAAAGAGCAAATGTTTACCATGAAGGTCAAAGGGGGAGCTGATGATGCTACTGAGGAAGTGACAGTTTATGACTATTTTGTTAACCATAGAAACATTCAACTTCGATACTCAGCTGATCTGCCCTGTATTAATGTTGGCAAGCCCAAACGACCAACTTACTTCCCCCTTGAGCTTTGCTCCTTGGTGTCTTTGCAACGCTATACAAAGGCACTTTCCACTCTTCAAAGGGCTTCTTTAGTAGAGAAGTCTAGGCAGAAGCCACAAGAGCGTATGAGGGTTCTCTCTGATGCTCTGAAAATAAGCAACTATGGCGCTGAACCCATGCTTCGCAATTGTGGTGTTCAGATAAACCCCAGCTTTACTCAAGTGGATGGTCGTGTTTTGCAAGCTCCAAGGTTAAAGTTTGGCAACGGGGAGGATTTCAATCCAAGGAATGGTAGATGGAATTTTAATAATAAGAAAATTGTTGATCCAGTGAAGATAGAGAGATGGGCTGTGGTCAACTTTTCAGCACGCTGCAATATTCAAGGACTTGTGAGGGACCTGATCAAATGTGGAAATATGAAGGGAATAGTGGTAGAAGACCCTTTTGATGTATTTGAAGAAAATGCTCAGTTTAGGCGTGCCCCTCCTGTGGTTAGGGTTGAGAAAATGTTCGAGCATATGATGTCTAAACTTCCAGGGGCACCCAAGTTTCTTCTGTGTCTGCTTCCTGAGCGGAAAAATTCTGATCTTTATGGACCGTGGAAGAAGAAGAATCTTGCTGACTTTGGTATTGTTACTCAGTGCATTGCACCTACCAAGGTCAATGATCAGTATCTGACTAATGTTTTGCTGAAAATCAATGCTAAGCTTGGTGGGATGAATTCACTGCTAGGAGTTGAACAATCTCCTTCCATTCCTATCATTTCCAAAGCTCCCACTCTCATTCTTGGCATGGATGTCTCACATGGCTCTCCAGGGCAATCCGATATTCCTTCAATTGCAGCGGTGGTTAGTTCTCGACACTGGCCTCTGATATCAAAATACAGGGCTTGTGTGCGTACTCAGTCTCCCAAGGTAGAGATGATTGATAATTTGTTCAAGAAAGTATCTGATAAGGAGGATGAAGGCATTATCAGGGAACTTCTGATTGATTTCTACTCAAGTTCTGGGAAGAGGAAGCCAGACAATATAATCATATTTAGGGATGGTGTAAGCGAGTCCCAATTTAATCAAGTTTTGAACCAAGAACTTGATCAGATCATTCAGGCATGCAAATTTCTTGATGAAAACTGGGACCCCAAATTTTTGGTTATTGTGGCTCAAAAGAACCACCACACAAAGTTCTTCCAGCCTGGATCACCCGATAATGTTCCCCCGGGCACTGTTATTGACAATAAAGTTTGCCATCCTCGCAATTACGATTTCTATTTGTGTGCTCATGCTGGAATGATAGGCACCACTAGGCCTACTCATTATCATGTTCTGTTAGATGAAATTGGCTTCTCTGCAGATGATCTACAGGAACTTGTTCATTCTCTGTCCTATGTGTATCAAAGGAGCACGACTGCCATTTCTGTTGTTGCTCCAATATGCTATGCTCACCTTGCCGCAACTCAAATGGGACAGTTTATGAAGTTTGAGGACAAATCTGAGACATCATCAAGTCATGGTGGCCTGACTGCTGCTGGTGCTGTTCCCGTTCCTCAGTTGCCTAAATTGGAGGAGAAGGTCTGCAACTCCATGTTCTTTTGTTGA 2787 0.4399 MVHLLESRLPDMDLFETNGNGNGNDAEDSLPPPPPVVPLDVVPVKADLELPPPEPIKKKPSKVPMARRGTGSKGTKLQLLTNHFKVNVNNNDGHFFQYSVSLAYEDGRPVEGKGVGRKVLDKVHETYASELNGKDFAYDGEKTLFTVGSLARNKLEFQVVLEDVTSNRNNGNCSPEHGSPNETDKKRVRRPYRAKTFKVELSFASKIPMQAISNALRGQESENFQEAIRVLDIILRQHAAKQGCLLVRQSYFHNDPKNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIITPGPVVDFLIANQNVRDPFSLDWAKAKRTLKNLRIKTSPSNQEFKITGLSELPCKEQMFTMKVKGGADDATEEVTVYDYFVNHRNIQLRYSADLPCINVGKPKRPTYFPLELCSLVSLQRYTKALSTLQRASLVEKSRQKPQERMRVLSDALKISNYGAEPMLRNCGVQINPSFTQVDGRVLQAPRLKFGNGEDFNPRNGRWNFNNKKIVDPVKIERWAVVNFSARCNIQGLVRDLIKCGNMKGIVVEDPFDVFEENAQFRRAPPVVRVEKMFEHMMSKLPGAPKFLLCLLPERKNSDLYGPWKKKNLADFGIVTQCIAPTKVNDQYLTNVLLKINAKLGGMNSLLGVEQSPSIPIISKAPTLILGMDVSHGSPGQSDIPSIAAVVSSRHWPLISKYRACVRTQSPKVEMIDNLFKKVSDKEDEGIIRELLIDFYSSSGKRKPDNIIIFRDGVSESQFNQVLNQELDQIIQACKFLDENWDPKFLVIVAQKNHHTKFFQPGSPDNVPPGTVIDNKVCHPRNYDFYLCAHAGMIGTTRPTHYHVLLDEIGFSADDLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEDKSETSSSHGGLTAAGAVPVPQLPKLEEKVCNSMFFC 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1465 928 CDD Piwi_ago-like 456 883 IPR045246 -
Lal18g1465 928 Gene3D - 476 642 - -
Lal18g1465 928 Gene3D paz domain 291 416 - -
Lal18g1465 928 Pfam N-terminal domain of argonaute 76 235 IPR032474 -
Lal18g1465 928 MobiDBLite consensus disorder prediction 48 72 - -
Lal18g1465 928 Gene3D - 648 928 IPR036397 GO:0003676
Lal18g1465 928 SMART DUF1785_2 245 297 IPR014811 -
Lal18g1465 928 ProSiteProfiles PAZ domain profile. 322 412 IPR003100 GO:0005515
Lal18g1465 928 SUPERFAMILY Ribonuclease H-like 573 887 IPR012337 -
Lal18g1465 928 MobiDBLite consensus disorder prediction 166 187 - -
Lal18g1465 928 SMART Piwi_a_2 581 889 IPR003165 GO:0003676
Lal18g1465 928 Pfam Argonaute linker 1 domain 247 295 IPR014811 -
Lal18g1465 928 MobiDBLite consensus disorder prediction 9 35 - -
Lal18g1465 928 Coils Coil 754 774 - -
Lal18g1465 928 Pfam PAZ domain 301 428 IPR003100 GO:0005515
Lal18g1465 928 ProSiteProfiles Piwi domain profile. 581 889 IPR003165 GO:0003676
Lal18g1465 928 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 11 927 - -
Lal18g1465 928 SUPERFAMILY PAZ domain 292 452 IPR036085 GO:0005515
Lal18g1465 928 Pfam Argonaute linker 2 domain 438 484 IPR032472 -
Lal18g1465 928 Pfam Piwi domain 582 889 IPR003165 GO:0003676
Lal18g1465 928 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 11 927 - -
Lal18g1465 928 CDD PAZ_argonaute_like 297 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1465 Lal-Chr18 16632821 16640625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1465 67 928 Eukaryotic Initiation Factors Gene Family AT5G43810 35.171 1.20e-164 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1465 K11593 - gmx:100779439 1587.01