Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1458 ATGAATAAGAGGTCGTATATGTTGTTGTTGATGAATGGAGTAGGAGCTATTGGGAAAGGCATGCAGGCTATTTGGTTGTTATTTTTGTTGTTGGTAATGGTGGCTATTGCATTGGGGAATTCGGATATTGAGGCACTCCTTAAACTCAAGAAGAGCATTCAGAATGACCCTTCTGGACTAGTTGTTAATTCTTGGGATTCTAAGTCCTTAAATTCTGATGGATGCCCTCAAAATTGGTATGGCATATTGTGTAGTGAGGGCGATGTTATTTCAATCACTCTCGATAATGCTGGTTTGGTTGGAGAGTTCAATTTCCTTGCCATTAGTGGCCTTGAAATGCTTCACAACTTGTCAATTGTGAACAATCAGTTCACAGGAAGTATCTTACATATTGGTCAAATGGAGTCACTTCAATTTCTTGATTTGTCACTCAACAAGTTTACTGGGTTGGTACCGTCTAATCTTGATAAATTAAGAAATTTAGTATATCTGAATCTTTCTTCAAATGATTTTGGAGGCGCTCTTCCTATTGGCTTTCACAAACTTGAGAGGTTGAAGTATTTAGATTTGCACAGTAATAACTTTTCGGGTGATATCATGCATATATTTTCTCAGATGGGTAGTGTGGTGCATGTTGACTTAAGCAGTAACAGGTTTTCTGGTATAGTGGATTTGGGACTTGGAGATGACTCCTTTCTCTCCTCGATTCGATATTTAAATATTAGCCACAATTCCTTGACCGGTGAGCTTTTTGCTCATGATGGTATGCCATACCTTGACAATTTGGTGATCTTTGATGCAAGTAATAATCAGTTAGTGGGTAATATACCTTCCTTCGGGTTTGTTGTATCGCTAAGGGTTCTTCGACTTGGATGCAACCAGTTGTCAGGTTCACTGCCTGAAGAATTATTGAAGGAAAGTTCAATGTTGTTGTCTGAACTGGATCTTAGTCAAAACAGGCTTGAAGGTCCTATTGAAAGTATTACCTCTGTAACTCTGAGGAAGCTTAATATATCTTCAAACAAATTGTCAGGCCCCTTACCTCTCACGGTAGGCCACTGTGCCATCGTAGATTTGAGTAATAACACACTGTCGGGTAATATTTCAAGGATCCAGTATTGGGGTAACTATGTGGAAATTATTCAGCTGAGTTCAAACTCACTGGAAGGAATGCTGCCAAACCAAACTTCTCAATTTTTAAGGCTAACTGCACTGAAGGTATCCGATAACTCATTGGAGGGCTTTCTCCCGCCAGTGTTAGGAACATACCCTGAACTAAAAGAGATTGATCTAAGTCGCAACCAGCTTTCCGGTTTCCTCCTGCCAAACCTTTTCAACTCAACGAAGTTGACTAATCTGAACTTCTCAAACAATAAGATTTCCGGATCCATTCCTATTCAACTTCAGCAAATTCCAAATGATCCATTAGTTTCTGCAGAAAATTTTAGTCTTGTGTCTCTTGATCTTTCACACAACAACTTGAGCGGGAACCTTCCTTCAAATATAAGTAAGTTTGACAATTTGGCATACCTCAACCTATGTGACAACAAATTGGAAGGTACTATTCCTGATGACTTTCCAGTTAAATTGAGAGAACTCAATGTGTCATTCAACGATCTTTCTGGTGTGATACCAGCCAACTTAATGCAGTTTCCTGAATCAGCATTTCATCCCGGAAATACTTTGCTGATATTTCCACATTCACCATCATCACCAAAGAATGCTTCCGGCCTAGGTTCGGGAGAACATCGTTCACATAAAAAATCTGCAACTAGGAGAGCCTTGATTGCAAGTTCAGTTACTGGTGCTTTCGTGATAGCTTTTATTGGTATTATAATCATTTACTATAGGCTTTGTTGGCAAAATGAAAAGACTTCAAAACAAAATGGAGCAAGAGGCATCACTCAAGAGAGTTCTTCCACATTAACTAGAGAGGCACCTAATAAAAATTTAGAAGGGTCGCTTTCTACTGAAGGGGGGTCTCCTGATGATGCTAGAAACATTCATGCAATGGTAAAGAAGCCGGAAGATCTTAAACATCCTGAAATAGTTAAGAATGATGAAGGAACATCTTCGCCGATATCTTTTTTGTCTGCTTCAAATCCTTCATCTTCTAAAAGCTATCAGTTTGAGAATCCTGCTTCCCTCAGAGTATCCTCTCCGGATAAACTGGTTAAGGACTTGCATATATTTGATGGGTCATTGGTGCTAACCGCAGAAGAACTTTCGAGTGCTCCAGCAGAAGTTATTGGAAGGAGTTGTCATGGAACACTGTATAAAGCTACACTTGAGTCTGGTCATGCATTGGCTATCAAATGGTTAAGGGAAGGAATAACTAAAGGAAAAAGGGAGTTTGCAAGGGAAGTAAAAAAACTTGGGACAATCAAGCATCCGAGTCTGGTTTCTATTCAGGGTTACTACCTCGGGCCAAAGGAGCACGAGAGGTTGATTATATCAAGTTACATGAATGCACAATCTATTGACATATATCTGCATGAGGCAGATAAAAGAAATCTCCATCCTTTGTCACTTGATGAAAGGCTCAGGGTGGCTGTAGACGTGGCTCGGTGTCTGAATTACTTACATAATGAGAAAGCCATACCTCATGGCAACCTCAAATCCACAAATATTCTACTAGGAGCTCCTAACCGAAATGTCTTGCTCACCGATTACAGTCTGCACCGATTACTAACTCCTGCTGGCACCGCTGAGCAAGTTTTGAATGCAGGTGCACTTGGTTATAGACCTCCCGAGTTTGCTAGGTCAAGCAAACCATGTCCATCCTTAAAAAGTGATGTCTATGCATTTGGAGCTGTCTTGTTAGAGCTCCTAACAGGAAGAAGCCCTGGAGAAACAGTTTCTGGGATTCAAGGTGTGATTGAACTCACAGATTGGGTCAGGATTTTAGCCGAAGAAAACCGATCTAGCCAATGCTTCGATAGGTTACTAATGGACAAGCACCACATTGGTGAAAGATCATCTAAAATTCTTGATGACATGCTAAAGGTAGCTCTTAAATGTACCCTTCCTCCATCAGATAGACCAGACATGAATACTGTTTTTGAAGATCTTTCAACAATAAGGTAG 3087 0.402 MNKRSYMLLLMNGVGAIGKGMQAIWLLFLLLVMVAIALGNSDIEALLKLKKSIQNDPSGLVVNSWDSKSLNSDGCPQNWYGILCSEGDVISITLDNAGLVGEFNFLAISGLEMLHNLSIVNNQFTGSILHIGQMESLQFLDLSLNKFTGLVPSNLDKLRNLVYLNLSSNDFGGALPIGFHKLERLKYLDLHSNNFSGDIMHIFSQMGSVVHVDLSSNRFSGIVDLGLGDDSFLSSIRYLNISHNSLTGELFAHDGMPYLDNLVIFDASNNQLVGNIPSFGFVVSLRVLRLGCNQLSGSLPEELLKESSMLLSELDLSQNRLEGPIESITSVTLRKLNISSNKLSGPLPLTVGHCAIVDLSNNTLSGNISRIQYWGNYVEIIQLSSNSLEGMLPNQTSQFLRLTALKVSDNSLEGFLPPVLGTYPELKEIDLSRNQLSGFLLPNLFNSTKLTNLNFSNNKISGSIPIQLQQIPNDPLVSAENFSLVSLDLSHNNLSGNLPSNISKFDNLAYLNLCDNKLEGTIPDDFPVKLRELNVSFNDLSGVIPANLMQFPESAFHPGNTLLIFPHSPSSPKNASGLGSGEHRSHKKSATRRALIASSVTGAFVIAFIGIIIIYYRLCWQNEKTSKQNGARGITQESSSTLTREAPNKNLEGSLSTEGGSPDDARNIHAMVKKPEDLKHPEIVKNDEGTSSPISFLSASNPSSSKSYQFENPASLRVSSPDKLVKDLHIFDGSLVLTAEELSSAPAEVIGRSCHGTLYKATLESGHALAIKWLREGITKGKREFAREVKKLGTIKHPSLVSIQGYYLGPKEHERLIISSYMNAQSIDIYLHEADKRNLHPLSLDERLRVAVDVARCLNYLHNEKAIPHGNLKSTNILLGAPNRNVLLTDYSLHRLLTPAGTAEQVLNAGALGYRPPEFARSSKPCPSLKSDVYAFGAVLLELLTGRSPGETVSGIQGVIELTDWVRILAEENRSSQCFDRLLMDKHHIGERSSKILDDMLKVALKCTLPPSDRPDMNTVFEDLSTIR 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1458 1028 MobiDBLite consensus disorder prediction 626 703 - -
Lal18g1458 1028 Pfam Protein tyrosine and serine/threonine kinase 748 976 IPR001245 GO:0004672|GO:0006468
Lal18g1458 1028 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 21 1027 - -
Lal18g1458 1028 ProSiteProfiles Protein kinase domain profile. 744 1027 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1458 1028 Pfam Leucine rich repeat N-terminal domain 40 85 IPR013210 -
Lal18g1458 1028 SUPERFAMILY L domain-like 358 551 - -
Lal18g1458 1028 MobiDBLite consensus disorder prediction 626 661 - -
Lal18g1458 1028 Gene3D Phosphorylase Kinase; domain 1 750 822 - -
Lal18g1458 1028 MobiDBLite consensus disorder prediction 567 592 - -
Lal18g1458 1028 Gene3D Ribonuclease Inhibitor 232 574 IPR032675 -
Lal18g1458 1028 PANTHER OS07G0626500 PROTEIN 21 1027 - -
Lal18g1458 1028 MobiDBLite consensus disorder prediction 667 686 - -
Lal18g1458 1028 Gene3D Ribonuclease Inhibitor 39 231 IPR032675 -
Lal18g1458 1028 SUPERFAMILY L domain-like 42 326 - -
Lal18g1458 1028 Pfam Leucine Rich repeat 481 496 IPR001611 GO:0005515
Lal18g1458 1028 SUPERFAMILY Protein kinase-like (PK-like) 748 1024 IPR011009 -
Lal18g1458 1028 MobiDBLite consensus disorder prediction 688 703 - -
Lal18g1458 1028 Gene3D Transferase(Phosphotransferase) domain 1 823 1028 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1458 Lal-Chr18 16598787 16604289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1458 40 557 Receptor kinase-like Gene Family AT5G07280 31.053 6.90e-43 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal18g1458 PK_Tyr_Ser-Thr 6.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1458 - - ccaj:109792420 1544.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1458 18 16598787 16604289 Lal18g1458 18 16598787 16604289 ECH
Lal18g1458 18 16598787 16604289 Lal22g0163 22 1018680 1022089 LSH