Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1445 ATGTCTGATGACATGCTGATGCATTTCTCTTCAAACTCTTCCAACCAATCGGATCAGTCTCTGCCTACAAAGATTGCAAAGCTGGAAGCTCGAATGATGGGAAAGGGTTCCTCCAATGTTTCTCATCAGTCAACTTGGACCTCTCTTCCTTCTTCAGCTGGGAAATTTGCAGGAGCTTCTGAGGATTTGGTTGAACCAACCACTTCCAGTGATTCTGATGATGACAATGGTGGGGAATTCTTAATACAAGCCAACACAGCGAAGCGCCTAAAATGTGAAAAACATGCTGACTCTAACATTTTTGACCTTGTTGAGGTTGTTACTGATAGAAGACAAATTAGTCTTGAGGCTGCAGAGACAAAAGCTAACGTTGATGTGAATAGGAAAAAACCTGGTCGTGGAAGAGGCGGTTCTGGTTCAAGCAGAGGCCGCGGTTCCCGAGTTAATGATCAGACCAGAACTCAGATTCCTCCTCCAGCGGTTTTGGCTTCAAATGGTCAGATTGATAATGATGGAAGACTCAAAGATCAGTTTCTTAGTGATAATTATGCTTCATTAGAGGAGGAAGTTGCATCTTTACGTGCAAAAGTTGTTGCATTGGAGGAGGACTTGCGTAAATCAAAACAAGAGACCTCTGATTATCAGAACCTTTGTCGACAGTTAGAAAAGGAACTGAAAGACCTAACAGGTCATGAACAACAAATGAAGCCTAAGAGAACGAAGATAATATCTGATTTGCTGATATCAGTTTCAAAGGCTGAGAGACAAGAGACAAGGCTAAAAGTACGACAAGATTCATTGAGACTTGGAAATGTTGGTGTAATCAGAGCTGGAACAGTCATATCTGAGACCTGGGAAGATGGTCAAGCATTGAAGGATCTGAATGCCCAGCTTAGACAACTAATAGAAATGAAAGAGGCAATTGAACGGCAGCGCAAATTATTTAAGAAAAAACAACCTGATAAGGGTGATGGAACAGATGCAGAGACTGGATTAGCGGAAGATGTTCTCATTCATGATGAAATCTACAAGTCTCGACTATCTAGTATTAAACGGGAAGAAGAAACTATTCTGCGGGAGAGAGATCGTTATGAACTAGAGAAGGGGAAATTGATAAGGGAAATGAAACGCATACGGGATGAAGATGGTTCAAGGTTTAACAACTTTCAGATTCTTAATCATCGCTATGCCCTTCTAAACCTTCTTGGAAAGGGAGGATTCAGTGAGGTTTACAAGGCTTTTGACTTGGTGGAGCATAGATATGTTGCATGCAAGCTTCATGGTTTAAATGCTCAATGGAGTGAAGAGAAGAAGCAAAGTTACATACGACATGCAATTCGAGAATACAATATTCACAAGACCCTTATGCATCATCACATCGTTCGTTTATGGGACATCTTTGAGATTGATCACAATACATTCTGCACTGTTCTAGAGTACTGCAGTGGGAAGGATCTTGATGCTGTCCTTAAAGCAACACCTATATTACCTGAGAGGGAGGCTAGGGTAATTCTAGTTCAGGTTTTTCAAGGTCTTGTTTACATGAATAAAAGGACTCAGAAGATTATCCATTATGATTTAAAGCCTGGAAACGTTCTCTTTGACGAGCTTGGTGTTGCCAAAGTGACTGATTTTGGTCTCAGTAAAATAGTGGAGGATGACGTGGGATCCCAGGGTATGGAACTTACATCTCAAGGTGCTGGAACATATTGGTATTTACCTCCTGAATGCTTTGAGCTCAGCAAGACACCTCTTATATCCTCAAAGGTTGATGTCTGGTCTGCTGGTATTTTGTTTTATCAAATGCTCTTTGGACGACGCCCTTTTGGGCATGACCAATCGCAAGAGAGAATACTTCGTGAAGACACAATCATTAAGGCACGCCGAGTTGAATTTCCTTCTAGGCCTACTGTTTCTAATGAGGCAAAGGATTTGATTCGGCGGTGTCTAACATATAATCAGGCTGACAGACCAGATGTATTAACCATTGCTCAAGATCCATATCTCACTTACTCAAAGAAGTAA 2025 0.4133 MSDDMLMHFSSNSSNQSDQSLPTKIAKLEARMMGKGSSNVSHQSTWTSLPSSAGKFAGASEDLVEPTTSSDSDDDNGGEFLIQANTAKRLKCEKHADSNIFDLVEVVTDRRQISLEAAETKANVDVNRKKPGRGRGGSGSSRGRGSRVNDQTRTQIPPPAVLASNGQIDNDGRLKDQFLSDNYASLEEEVASLRAKVVALEEDLRKSKQETSDYQNLCRQLEKELKDLTGHEQQMKPKRTKIISDLLISVSKAERQETRLKVRQDSLRLGNVGVIRAGTVISETWEDGQALKDLNAQLRQLIEMKEAIERQRKLFKKKQPDKGDGTDAETGLAEDVLIHDEIYKSRLSSIKREEETILRERDRYELEKGKLIREMKRIRDEDGSRFNNFQILNHRYALLNLLGKGGFSEVYKAFDLVEHRYVACKLHGLNAQWSEEKKQSYIRHAIREYNIHKTLMHHHIVRLWDIFEIDHNTFCTVLEYCSGKDLDAVLKATPILPEREARVILVQVFQGLVYMNKRTQKIIHYDLKPGNVLFDELGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQSQERILREDTIIKARRVEFPSRPTVSNEAKDLIRRCLTYNQADRPDVLTIAQDPYLTYSKK 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1445 674 PANTHER MIXED LINEAGE PROTEIN KINASE 1 674 - -
Lal18g1445 674 CDD STKc_TLK 395 668 - -
Lal18g1445 674 ProSiteProfiles Protein kinase domain profile. 396 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1445 674 Coils Coil 291 318 - -
Lal18g1445 674 SUPERFAMILY Protein kinase-like (PK-like) 388 670 IPR011009 -
Lal18g1445 674 Gene3D Transferase(Phosphotransferase) domain 1 387 674 - -
Lal18g1445 674 SMART serkin_6 396 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1445 674 Coils Coil 347 381 - -
Lal18g1445 674 MobiDBLite consensus disorder prediction 1 53 - -
Lal18g1445 674 MobiDBLite consensus disorder prediction 36 53 - -
Lal18g1445 674 MobiDBLite consensus disorder prediction 142 161 - -
Lal18g1445 674 PANTHER BNAC09G36930D PROTEIN 1 674 - -
Lal18g1445 674 Coils Coil 176 234 - -
Lal18g1445 674 MobiDBLite consensus disorder prediction 1 23 - -
Lal18g1445 674 Pfam Protein kinase domain 397 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1445 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 522 534 IPR008271 GO:0004672|GO:0006468
Lal18g1445 674 MobiDBLite consensus disorder prediction 122 168 - -
Lal18g1445 674 ProSitePatterns Protein kinases ATP-binding region signature. 402 425 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1445 Lal-Chr18 16508503 16518106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1445 379 674 MAP Kinase Kinase Kinase AT3G13530 27.425 5.01e-27 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Lal18g1445 Pkinase 1.1e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1445 K08864 - gmx:100805168 1140.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1445 18 16508503 16518106 Lal18g1445 18 16508503 16518106 ECH
Lal18g1445 18 16508503 16518106 Lal6g0180 6 1237880 1246437 LSH