Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1442 ATGAAGCTCAAATTTGTGTTCCTTCTGTTGTTAGAGTATGTTTGTTTCACTGTGGAATCCAAGTGTATCAAAGGGTGTGATATAGCTTTAGCATCATACTATGTTCCTGTCTGGCCTACTGTATCACTAGGAAATATAACTAACTACATGTATTCAAATGTCTTAACCAAGTCTAACGTTATTATCAGCTACAATAAAGACAAAGTATTCAATGGAGATGTGATGCTAGCTTTATACAGAACCAATATTCCAATCCCATGTGATTGCATTGGTGGTGAGTTTCTTGGGCATGTGTTTGAGTACACAGCTGTTGCAGGAGACACTTATGATTTGATTGCAATGAAGAGATATTCCAATCTGACCACAGTTGAGTTCTTGAAGAGGTTCAATAGCTATGATCCTAATCATATACCGGTTAATGCTAAGGTTAATGTCACTGTCAATTGTTCTTGTGGGAATAGTCTGATTTCAAAAGATTATGGATTGTTCATTACCTATCCCTTAAGGCCAGGGAATAATCTTCAGGAGCTTTCCAAGGAGACTAATATTGATGCAAAGTTGCTGCAGAGTTATAACCCCAGTGTTAATTTCAGCCAAGAAAATGGAATTGTTTTCATTCCAGGAAGAGATCAAAATGGAGTCTATGTTCCCTTATACCCAAGAACAGAAGGTCTAGCCAGGGGTGTTGCAGTTGGAATATCTATAGCAGCATCATGTGGGCTTGTTTTGTTAGTAATATGTATATATGATAGATACTTCAAGAAGAAGGAAGGAGAAAAAGCTAAATTGTCTATAGAAAATTCATTAGTGCTTTCAACTCAAGATGCCTCTGGTAGCAGTGAATATGAAACTTCAGGATCCAGTGTGCATGCTTCTGGCCTTACAGGCATAATGGTGGCAAAATCATTGGAGTTCTCATATCAAGAACTAGCCAAGGCTACAAATAACTTCAGCTTGGATAATAAAATTGGTCAAGGTGGTTTTGGAGCTGTCTATTATGCAGAACTTAGAGGGGAGAAAACAGCAATTAAGAAGATGGATGTTCAAGCATCATCAGAATTTCTTGCTGAGTTGAAGGTCTTAACTCATGTTCATCACTTGAATTTGGTGAGGTTGATTGGATATTGTGTTGAGGGATCTCTTTTCCTTGTATATGAACACATTGACAATGGAAACTTAGGCCAATATTTGCATGGTAAAGGGAAGGATCCATTGCCATGGTCAACTAGATTGCAAATTGCTCTGGATTCAGCAAGAGGTCTTGAATATATTCATGAGCACACTGTGCCTTTGTATATCCATCGTGATGTAAAATCTGCTAATATATTGATAGACAAAAATTTACGTGGAAAGGTAGCAGATTTTGGCCTAACTAAACTTATTGAAGTTGGAACCTCCTCACTTCACACTCGTCTTGTGGGAACATTTGGATACATGCCACCAGAGTATGCTCAATATGGTGACATATCTCCAAAAATAGATGTATATGCATTTGGAGTTGTTCTATATGAACTTATTTCAGCAAAGAATGCTGTTCTGAAGACAGGTGAAACAGTTGCTGAATCAAAAGGCCTTGTATCTTTGTTTGAGGGAGCACTTAACCATATTAATCCTTTAGAAGCTCTTAGCACACTGGTTGACCCTAGGCTTGGAGATAACTATCCAATTGAATCAGTTCTCAAGATAGCACAAGTTGGGAGAGCATGTACAAGAGATAATCCAATACTACGCCCAAACATGAAATCTATAGTAGTTGCTCTTATGACACTTTCATCATCTACTCATCAGGATCACACTTCTTCTTCTTCCTACGATCATCAAACTCTCATAAATCTACTCTTAGATGAAGGCTTTCGAGGGATAATTACACCAACTTTTTAA 1881 0.3775 MKLKFVFLLLLEYVCFTVESKCIKGCDIALASYYVPVWPTVSLGNITNYMYSNVLTKSNVIISYNKDKVFNGDVMLALYRTNIPIPCDCIGGEFLGHVFEYTAVAGDTYDLIAMKRYSNLTTVEFLKRFNSYDPNHIPVNAKVNVTVNCSCGNSLISKDYGLFITYPLRPGNNLQELSKETNIDAKLLQSYNPSVNFSQENGIVFIPGRDQNGVYVPLYPRTEGLARGVAVGISIAASCGLVLLVICIYDRYFKKKEGEKAKLSIENSLVLSTQDASGSSEYETSGSSVHASGLTGIMVAKSLEFSYQELAKATNNFSLDNKIGQGGFGAVYYAELRGEKTAIKKMDVQASSEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEHIDNGNLGQYLHGKGKDPLPWSTRLQIALDSARGLEYIHEHTVPLYIHRDVKSANILIDKNLRGKVADFGLTKLIEVGTSSLHTRLVGTFGYMPPEYAQYGDISPKIDVYAFGVVLYELISAKNAVLKTGETVAESKGLVSLFEGALNHINPLEALSTLVDPRLGDNYPIESVLKIAQVGRACTRDNPILRPNMKSIVVALMTLSSSTHQDHTSSSSYDHQTLINLLLDEGFRGIITPTF 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1442 626 Gene3D Phosphorylase Kinase; domain 1 298 387 - -
Lal18g1442 626 Pfam Protein tyrosine and serine/threonine kinase 318 584 IPR001245 GO:0004672|GO:0006468
Lal18g1442 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Lal18g1442 626 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 6 613 IPR044812 GO:0019199|GO:0045087
Lal18g1442 626 SUPERFAMILY Protein kinase-like (PK-like) 297 587 IPR011009 -
Lal18g1442 626 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-LIKE 6 613 - -
Lal18g1442 626 SMART serkin_6 317 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1442 626 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524
Lal18g1442 626 ProSiteProfiles Protein kinase domain profile. 317 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1442 626 Gene3D Transferase(Phosphotransferase) domain 1 388 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1442 Lal-Chr18 16477524 16481395 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1442 1 613 Receptor kinase-like Gene Family AT3G21630 52.800 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lal18g1442 PK_Tyr_Ser-Thr 1.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1442 - K13429 gmx:100776847 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1442 18 16477524 16481395 Lal6g0184 6 1275528 1279986 LSH