Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1437 ATGGAGGAGATGAGAAAGACACATAACAAACACCATTTTGGAGGATCCAAGATCCGAATACTCCTACAGCATTGCTGTCTTTACCTCTCCATCTGCACCATTTTCATCACTTCAACTCAAGCCTTTGATTATGGTGATGCCCTTTCAAAGAGCCTACTCTACTTTGAAGCACAACGCTCTGGGAGGATACCTTATAACCAACGTGTAACATGGCGCCACCATTCTGGCCTCACTGATGGCTTAGAACAAGGAGTGGACTTGGTAGGAGGGTATTATGATGCTGGTGATCATGTGAAGTTTGGTTTACCAATGGCATTCACAGTGACAATGTTATCATGGGGTGCTATTGAGTATTGGCAACAAATTGCAGATGCAGGTGAATTAGAACAAACAATGGAAGCAATCAAATGGGGCACTGATTACTTCATCAAAGCTCACACTAGCCCAAATGTGTTATGGGCAGAGGTGGGTGATGGTGACACTGATCATTATTGCTGGCAACGCCCTGAGGACATGACAACTTCACGGCGAGCTTTCAAGATAGATGAGAACAACCCTGGTTCAGATCTGGCCGGAGAGACGGCGGCAGCTATGGCATCTGCCTCCATTTTGTTTAGGAAGACTAACCCACATTATTCTCACCTTCTTCTACACCATGCTCAACAGTTATTTGAGTTTGGAGACAAATATAGAGGAAATTATGATGCAAGTGTGGGAGTAGTGAAGAGTTACTATGCGTCGGTGAGTGGATATATGGATGAGTTGTTATGGGCAGCCATGTGGTTGTACAAGGCCACCGACAATGAAGAATATTTTGAGTACATTATTTCTAAGGCTCATACTTTTGGTGGCATTGGATGGTCCATTTCTGAGTTCAGTTGGGATGTTAAATATGCTGGTCTTCAAGTCCTAGCATCTAAGTTTTTGAACGAAGAAAAACACAAGAAGCATGGTGATATACTCAAACAATATAGATCAAAAGCAGAATTCTATATATGTTCTTGTCTCAACAAAAACAATAATGGCAGCAATGTGGAAAGAACCCCAGCTGGATTATTATATGTTAGACAGTGGAATAACATGCAATACGTTTCAAATGCAGCATTTTTGCTAACACTGTATTCTGACTTCCTCCAAAACACAAATCATCATAAACTCAAGTGTCATGAGGGCATTGTACACCATGAAGAAATTATCAGTTTTGCTAAATCACAAGTTGATTATATTTTAGGCTCTAACCCTATGAACATGAGTTACTTAGTGGGCTATGGACCTAGCTACCCCAAAAGGGTGCATCATAGAGGGGCATCCATTGTGTCATACAAAGAGAATAAAGGCTTCATAGGGTGTGCACAAGGGTATGATAATTGGTATAGTAAACAAACACCTAACCCTAATGTTTTAGTTGGAGCTTTGGTTGGAGGGCCTGATTTGGAAGACATTTTTGAAGACCAAAGTAACCCTTCTTGTCAATCTTACCTCACTTTCATATCTTCCTCTCCTCTCTACAACACCCCTTCTTCCATTTCCTATCTTCTTAACTCCACACCTTCCCTCATAGCTCAATCCAATAACATCACTGATGTTAATCCAATACCCACCAACACAATCATTACTGTTCCTGTTAACTGTTCTTGCTTCAATAACCTATATCAACACAACACTACATATACTTTGAAGACTCTAGGTGAAACTTACTTCAGTATTGCTAATAATACTTATCAGGCTCTTACTACATGTCAAGCTCTTATAGCACAGAATACATATGAGGTAACGAATCTCACTGTTGGTCTCAACTTGCACGTGCCACTCAGGTGTGCTTGTCCTACAAAGAAACAACTTGATGAAGGGTTCAAGTACTTGCTCACTTACCTTGTATCTGAAGGTGAATCTGTTGCTTCAATTGCTGAGATTTTTGGTGTTGATGAACAAAGTGTTCGGGATGCTAATGAACTTTCTCCCGATTCTATGATTTTCTTCTTTACACCTCTTTTGGTTCCTCTTAAGCAAGAGCCACCGGCAAAGTTACAAATTTTGACACCTTCGCCGCAGCCTCAGCCTCAGCCTCCTCCTCCATCACCGGAAGGGGATGGTGGTTCTTCAAGTTCTTCTAAGAAATGGGTTATTGTTGGTGTACCTCTTGGTGTTGTTCTTCTTGCGATCCTCCTTGTGTTTTTTATCTGTTTTTACCGGCGCCGCCGCGAGCCACCGCTTCCGGTGGTGGAAAGTACTAAGATTTTGTCGGATTCTACCACCACTGAAGGCACCAAGAAAGTGTCAGAAACCACACCCACTTCAGAATCATGGTCTCTCTCCTCTGAAGGGGTTCGCTATGCTGTTGAGTCATTGACACTGTACAAGTTTGAGGAGTTGGAGAAGGCCACAGGGTCATTCAGTGAAGAAAACAGGATCAAGGGTTCTGTTTATAGAGCTTCTTTCAAGGGCGATGATGCTGCTGTGAAGATTCTGAAAGGTGATGTTTCTGGTGAAATCAACATTCTGAAGAAGATCAACCACACAAACATTATAAGGTTGTCTGGTTTTTGTGTCTACAAAGGTAACACCTATCTTGTTTATGAGTTTGCTGAGAATGATTCTCTTGATGATTGGCTCCACAGTGTGGAGAAGAAATACAAGAATTCATTATCTTTGAGTTGGATACAAAGAGTTCAGATTGCACATGATGTTGCTGATGCACTTAATTACCTTCACAATTATGTAACCCCACCTCATGTTCATAAAAATTTGAAGAGTGGTAATGTTCTTTTAGATGGAAATTTTAGAGGTAAAGTTTCAAACTTTGGGTTAGCTAGAGTTGTGGAAGATGAAGGAGAAGAAGGGGGGTTTCAGTTAACAAGACATGTGGTAGGAACACAAGGTTACATGGCACCTGAGTATATTGAAAATGGTATGATTACTCCAAAAATGGATGTGTTTGCATTTGGTGTTGTGGTTTTGGAATTGCTTTCAGGAAAAGAAGCTGTTGTATCAGGAGAGCAGCTTCTATCAGCAACTATAAATCAAGTACTTGAAGGAGACAGTGTTAGACAGAAACTTAAGGGTTTCATGGATCCAAGTTTGAAGGGTGAATACCCTTTGGATCTGGCATATTCTTTGGCAGAGTTGGCCAAAAAATGTGTTGGTCGTGACCTCAATTCAAGACCAAACATTTCTCAAGTTCTTATGACTCTGTCTAAGATTCAATCCTCTATGTTAGATTGGGATCCATCTTATGAATTTGAACGGTCCAGATCTGACAGCAGATAG 3267 0.4108 MEEMRKTHNKHHFGGSKIRILLQHCCLYLSICTIFITSTQAFDYGDALSKSLLYFEAQRSGRIPYNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWGAIEYWQQIADAGELEQTMEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRRAFKIDENNPGSDLAGETAAAMASASILFRKTNPHYSHLLLHHAQQLFEFGDKYRGNYDASVGVVKSYYASVSGYMDELLWAAMWLYKATDNEEYFEYIISKAHTFGGIGWSISEFSWDVKYAGLQVLASKFLNEEKHKKHGDILKQYRSKAEFYICSCLNKNNNGSNVERTPAGLLYVRQWNNMQYVSNAAFLLTLYSDFLQNTNHHKLKCHEGIVHHEEIISFAKSQVDYILGSNPMNMSYLVGYGPSYPKRVHHRGASIVSYKENKGFIGCAQGYDNWYSKQTPNPNVLVGALVGGPDLEDIFEDQSNPSCQSYLTFISSSPLYNTPSSISYLLNSTPSLIAQSNNITDVNPIPTNTIITVPVNCSCFNNLYQHNTTYTLKTLGETYFSIANNTYQALTTCQALIAQNTYEVTNLTVGLNLHVPLRCACPTKKQLDEGFKYLLTYLVSEGESVASIAEIFGVDEQSVRDANELSPDSMIFFFTPLLVPLKQEPPAKLQILTPSPQPQPQPPPPSPEGDGGSSSSSKKWVIVGVPLGVVLLAILLVFFICFYRRRREPPLPVVESTKILSDSTTTEGTKKVSETTPTSESWSLSSEGVRYAVESLTLYKFEELEKATGSFSEENRIKGSVYRASFKGDDAAVKILKGDVSGEINILKKINHTNIIRLSGFCVYKGNTYLVYEFAENDSLDDWLHSVEKKYKNSLSLSWIQRVQIAHDVADALNYLHNYVTPPHVHKNLKSGNVLLDGNFRGKVSNFGLARVVEDEGEEGGFQLTRHVVGTQGYMAPEYIENGMITPKMDVFAFGVVVLELLSGKEAVVSGEQLLSATINQVLEGDSVRQKLKGFMDPSLKGEYPLDLAYSLAELAKKCVGRDLNSRPNISQVLMTLSKIQSSMLDWDPSYEFERSRSDSR 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1437 1088 PANTHER ENDO-1,4-BETA-GLUCANASE 20 501 - -
Lal18g1437 1088 CDD LysM 623 659 IPR018392 -
Lal18g1437 1088 SUPERFAMILY Six-hairpin glycosidases 42 502 IPR008928 GO:0005975
Lal18g1437 1088 MobiDBLite consensus disorder prediction 678 696 - -
Lal18g1437 1088 Gene3D LysM domain 619 675 IPR036779 -
Lal18g1437 1088 Gene3D - 40 504 IPR012341 GO:0005975
Lal18g1437 1088 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 408 434 IPR018221 -
Lal18g1437 1088 Gene3D Phosphorylase Kinase; domain 1 760 861 - -
Lal18g1437 1088 SUPERFAMILY Protein kinase-like (PK-like) 772 1062 IPR011009 -
Lal18g1437 1088 Pfam Protein kinase domain 825 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1437 1088 Pfam Glycosyl hydrolase family 9 44 487 IPR001701 GO:0004553|GO:0005975
Lal18g1437 1088 Gene3D Transferase(Phosphotransferase) domain 1 862 1077 - -
Lal18g1437 1088 Pfam LysM domain 624 667 IPR018392 -
Lal18g1437 1088 SMART LysM_2 623 667 IPR018392 -
Lal18g1437 1088 SMART LysM_2 556 603 IPR018392 -
Lal18g1437 1088 MobiDBLite consensus disorder prediction 677 702 - -
Lal18g1437 1088 ProSiteProfiles Protein kinase domain profile. 741 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1437 1088 ProSiteProfiles LysM domain profile. 622 666 IPR018392 -
Lal18g1437 1088 PANTHER ENDOGLUCANASE 11 20 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1437 Lal-Chr18 16430075 16436513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1437 37 502 Glycoside Hydrolase AT2G32990 75.536 0.0 752
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lal18g1437 Glyco_hydro_9 5e-140 CL0059
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1437 - - adu:107496789 853.203