Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal18g1419 | ATGCACCCACTCATAAACTCAGATCCAACACCACCAAACGACACCGTTCCAACACAACCCACAAACCCTATCATCGAAACAAGATTCCGCGGCGTCAGGAAGCGACCATGGGGTCGATTCGCCGCAGAGATAAGAGACCCATCGAAGAAAACGCGCGTCTGGTTAGGAACCTTCGATTCCGCCGAAGACGCCGCCCGAGCCTACGATTCAGCCGCTTTATCCTTCCGAGGACCCAAAGCCAAGACCAATTTTCCTTTCTCTTCCTCAAACCCTACTCAAATCGCAATCTACAATCGCGATTTCCAAAACCCTCGCGCTCACCGGTTCACTCAACCGGTGAACCGACCAACCAGCAGCGGCATGAGTAGCACGGTTGAATCGTTCAGCGGACCTAGGGTTCCGTCCTCATCGATCGTGATCCATCACCGGAGACCTCTTGATCCGGACACCGGCGATGATTGTCATAGCGATTGTGATTCTTCGTCTTCAGTGATCGATGATGAGGATTGCGTGCTCACTTCTTCGTTCCGGAAGTCCCTGCCTTTCGATCTCAACCTCCCTCCACCGGAGGATGACAACGGCGGCGGCGGCGGCGATTTCACCACCAATGAGCTTCTTGTAACCGCCCTGTGTCTCTAA | 639 | 0.5399 | MHPLINSDPTPPNDTVPTQPTNPIIETRFRGVRKRPWGRFAAEIRDPSKKTRVWLGTFDSAEDAARAYDSAALSFRGPKAKTNFPFSSSNPTQIAIYNRDFQNPRAHRFTQPVNRPTSSGMSSTVESFSGPRVPSSSIVIHHRRPLDPDTGDDCHSDCDSSSSVIDDEDCVLTSSFRKSLPFDLNLPPPEDDNGGGGGDFTTNELLVTALCL | 212 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal18g1419 | 212 | SMART | rav1_2 | 28 | 91 | IPR001471 | GO:0003700|GO:0006355 | |
Lal18g1419 | 212 | MobiDBLite | consensus disorder prediction | 145 | 164 | - | - | |
Lal18g1419 | 212 | MobiDBLite | consensus disorder prediction | 145 | 162 | - | - | |
Lal18g1419 | 212 | SUPERFAMILY | DNA-binding domain | 28 | 87 | IPR016177 | GO:0003677 | |
Lal18g1419 | 212 | PRINTS | Ethylene responsive element binding protein signature | 29 | 40 | IPR001471 | GO:0003700|GO:0006355 | |
Lal18g1419 | 212 | PRINTS | Ethylene responsive element binding protein signature | 51 | 67 | IPR001471 | GO:0003700|GO:0006355 | |
Lal18g1419 | 212 | MobiDBLite | consensus disorder prediction | 109 | 134 | - | - | |
Lal18g1419 | 212 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 | 25 | 184 | - | - | |
Lal18g1419 | 212 | Pfam | AP2 domain | 27 | 77 | IPR001471 | GO:0003700|GO:0006355 | |
Lal18g1419 | 212 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 25 | 184 | - | - | |
Lal18g1419 | 212 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Lal18g1419 | 212 | Gene3D | AP2/ERF domain | 27 | 87 | IPR036955 | GO:0003700|GO:0006355 | |
Lal18g1419 | 212 | MobiDBLite | consensus disorder prediction | 181 | 200 | - | - | |
Lal18g1419 | 212 | CDD | AP2 | 27 | 85 | IPR001471 | GO:0003700|GO:0006355 | |
Lal18g1419 | 212 | ProSiteProfiles | AP2/ERF domain profile. | 28 | 85 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal18g1419 | Lal-Chr18 | 16324136 | 16324774 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal18g1419 | 24 | 188 | AP2-EREBP Transcription Factor Family | AT1G50640 | 53.005 | 2.76e-35 | 122 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Lal18g1419 | AP2 | 2.3e-14 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal18g1419 | K09286 | - | cpap:110808864 | 184.111 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal18g1419 | 18 | 16324136 | 16324774 | Lal22g0187 | 22 | 1173449 | 1174096 | LSH |