Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1404 ATGGCTTCTTATCACTTCCTCTTGCTTGTTCTTGTAGCTGCAGCTAGAATTTATGAAGCAGAAGCTGCCAATAAGCTATCTACAAATTTTTACTCCTGCAGCTGCCCAAAACTGTTGCCTATAATAAAGAAAGGAGTCAAAAATGCAATCGCAAATGAAGCTCGCTTAGGAGCTTCCTTACTCAGATTGCATTTCCATGACTGCTTTGTAAATGGTTGCGATGCATCAATACTATTGGATGACACGACAAACTTCATAGGCGAGCAAACCGCGGTGGCTAACAATAATTCAGCTAGAGGATTTAATGTGATTAAGGATATTAAAGCAAATGTGGAGAAGGAATGCCCTGGGGTGGTTTCATGTGCTGATATTCTTGCTCTAGCTGCTCAATACTCAGTTGTTTATGTAATATTCTATACCACAAAGTTAGGAGGCCCTTCTTGGGAAGTAGGCTTAGGAAGAAGAGATTCAACCACTGCAAGCAGAAGTGATGCCAATAACTCCATTCCAGGACCCTTCCTAAGTTTAAGTGCTCTCATAAAGAATTTTGCTAACCAAGGGCTCTCGGTAAAAGACTTGGTGGCTCTTTCAGGGGCACACACCATTGGCCTCGCAAGTTGTAGAACTTTCACAGGACACATCTACAATGATTCCAGCATAGATGCTTCCTACGCCAAGTTCCTGCAGAGCAAGTGTCCCAGAAGTGGAAATGATATACATGAACCCCTTGACCATCAAACTCCAATCCATTTCGATAATCTATACTACAAGAATTTGTTGGATAAAAAGGTTCTTCTTCATTCCGACCAGGAGCTGTTCAATGCCAGTTTTACTGACAATCTGGTTAAGAAATATGCTACCGACACAGCTGCATTTTTTAAAGACTTCGCCCAGGGCATGGTCAAATTGAGCAGCATCAAGCCTCTCACAGGAAGCAAGGGCCAGATCAGAATCAATTGCGGGAAAGTCAATTAA 975 0.4226 MASYHFLLLVLVAAARIYEAEAANKLSTNFYSCSCPKLLPIIKKGVKNAIANEARLGASLLRLHFHDCFVNGCDASILLDDTTNFIGEQTAVANNNSARGFNVIKDIKANVEKECPGVVSCADILALAAQYSVVYVIFYTTKLGGPSWEVGLGRRDSTTASRSDANNSIPGPFLSLSALIKNFANQGLSVKDLVALSGAHTIGLASCRTFTGHIYNDSSIDASYAKFLQSKCPRSGNDIHEPLDHQTPIHFDNLYYKNLLDKKVLLHSDQELFNASFTDNLVKKYATDTAAFFKDFAQGMVKLSSIKPLTGSKGQIRINCGKVN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1404 324 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal18g1404 324 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal18g1404 324 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal18g1404 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal18g1404 324 Gene3D - 29 320 - -
Lal18g1404 324 Pfam Peroxidase 43 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal18g1404 324 SUPERFAMILY Heme-dependent peroxidases 26 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lal18g1404 324 CDD secretory_peroxidase 25 323 IPR033905 GO:0004601|GO:0042744
Lal18g1404 324 Gene3D Peroxidase, domain 2 170 303 - -
Lal18g1404 324 ProSiteProfiles Plant heme peroxidase family profile. 25 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal18g1404 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Lal18g1404 324 PANTHER PEROXIDASE 8 324 - -
Lal18g1404 324 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Lal18g1404 324 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal18g1404 324 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal18g1404 324 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal18g1404 324 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal18g1404 324 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal18g1404 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal18g1404 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal18g1404 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal18g1404 324 PANTHER PEROXIDASE 72-RELATED 8 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1404 Lal-Chr18 16237622 16239962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1404 18 324 Peroxidase AT5G05340 55.806 2.75e-121 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1404 K00430 - gmx:100793973 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0329 22 2085656 2088666 Lal18g1404 18 16237622 16239962 ECH
Lal18g1404 18 16237622 16239962 Lal18g1404 18 16237622 16239962 ECH