Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1401 ATGTCACCGGTTGCCGGAGCTCACGTCCCTCTCTTGCCGGAATCTAAGCTAAATCATGCAGAGCCGGCAACTGTATCCGGTGCTGTGTTCAATATCGCAACGAGTATAATTGGCGCCGGAATCATGTCTATTCCGGCGACACTGAAAGTTATGGGAGTAGTTCCGGCATTTGTGTTGATCCTGGTGATAGCTCTTCTTGCTGAGATATCGGTAGAGTTCTTAATGAGATTCACGCGTTCAGGCCAAACGACGACGTATGCTGGCGTGATGAGAGAAGCGTTTGGACCCGCAGGAGCAATAGCAGCTCAAGTTTGTGTTACAATCACTAATCTTGGCTGTTTAATCATGTACTTGATTATTATAGGGGATGTACTATCTGGAAAGCAGCAAGAATCAGATAAGGAAGTGCACTTGGGTATTTTGCAGCAGTGGCTTGGAATTCATTGGTGGACTTCACGCCAATTTACTCTCTTCATCACCTTAGTTGTCGTTATGCTTCCATTGGTTTTGTACCGACGTGTAGAGTCATTGAAGATCAGTTCTGCAATATCAACTCTTCTGGCAGTGGCATTTGTTGCAATATGTTCTGTGTTGGCAATTGTTGCTCTTGTTCAAGGAAAAACAGAAGCTCCAAGATTGTTTCCTCGTTTAGACCAACACACATCATTCTTTGATCTGTTCACCCCAGTTCCGGTCATAGTCACAGCCTATACATTTCATTTCAATGTACATCCAATTGGGTTTGAGCTTGTGAAGCCATCTGATATGACCACAGCAGTTAGAATAGCATTGATACTTTGTGCTATAATATACTTTCTCATTGGTCTATTTGGGTACCTATTGTTTGGTGATTCAACACAGTCAGATATTCTAGTCAATTTTGATCAGAATGCTGATTCTGCAGTTGGTTACTTGCTCAACACTCTAGTCCGTTTAAGCTATGTATTTCATGTTATGCTGGTGTTCCCTCTCCTCAACTTTTCATTGAGAGGTAACATAGATGAATTACTCTTCCCAAAGAAGCCTCTCTTAGCCACAGACAACAAGAGGTTTTTGATCCTCACTTTGGTGCTGCTAGTTTTCAGCTACATTGCTGCTATAGCAGTCCCAGATATTTGGTACTTGTTTCAGTTTGTTGGATCAACATCTGCAGTGAGCCTTGCCTTCATTTTCCCTGGTTCTATTGTCTTGAGGGATGTTTATGGCATATCAAAAAGGAGGGACAAAATTATAGCACTGGTTATGGTTGTAGTGGCTTCAGTAACAAGTGTGATTGCCCTTTCCACCAACGTATACAATTTATTAGGTGGCAAGTCATAA 1320 0.4227 MSPVAGAHVPLLPESKLNHAEPATVSGAVFNIATSIIGAGIMSIPATLKVMGVVPAFVLILVIALLAEISVEFLMRFTRSGQTTTYAGVMREAFGPAGAIAAQVCVTITNLGCLIMYLIIIGDVLSGKQQESDKEVHLGILQQWLGIHWWTSRQFTLFITLVVVMLPLVLYRRVESLKISSAISTLLAVAFVAICSVLAIVALVQGKTEAPRLFPRLDQHTSFFDLFTPVPVIVTAYTFHFNVHPIGFELVKPSDMTTAVRIALILCAIIYFLIGLFGYLLFGDSTQSDILVNFDQNADSAVGYLLNTLVRLSYVFHVMLVFPLLNFSLRGNIDELLFPKKPLLATDNKRFLILTLVLLVFSYIAAIAVPDIWYLFQFVGSTSAVSLAFIFPGSIVLRDVYGISKRRDKIIALVMVVVASVTSVIALSTNVYNLLGGKS 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1401 439 PANTHER AMINO ACID TRANSPORTER 3 436 - -
Lal18g1401 439 Pfam Transmembrane amino acid transporter protein 23 428 IPR013057 -
Lal18g1401 439 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 3 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1401 Lal-Chr18 16227102 16229749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1401 1 434 Amino Acid or Auxin Permease AAAP Family AT3G56200 59.862 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1401 - - gmx:100800330 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1401 18 16227102 16229749 Lal18g1401 18 16227102 16229749 ECH
Lal18g1401 18 16227102 16229749 Lal6g0212 6 1425535 1427970 LSH
Lal18g1401 18 16227102 16229749 Lal17g1601 17 17399983 17403286 PCT