Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1394 ATGGAGTACCAAACCTTGACTTCAAAAAACTTCTTTTACCAAAACCCTCTTCACATTTTACATCATTTCTCTCACAAGATTATGGAGAGACACAAATGGATGATTAAGCCCAAAAATCACTTCTTTGTCCTGTGTTTACTGCTTCTTATGTTCCCAGTGTTGGGTGAAGAGCATTGGGATGGTGTGATTGTAACACAGTCAAATTTGTTGGCACTTCAAGCCTTCAAGCAAGAGTTGGTTGATCCAAAAGGCTTCTTGAGAAGCTGGAATGACAGTGGCTATGGAGCTTGTAATGGAAGTTGGGTTGGAATCAAGTGTGCTCAAGGACAGGTTATTGTACTCCAGCTTCCTTGGAAAGGGTTAAAGGGCCATATCACTAATAGGATTGGTCAGCTTCAAGGGCTTAGAAAGCTTAGTCTCCATGATAACCAAATTGGTGGTTCAATCCCTACTGCATTGGGACTTCTTCCTAATCTAAGAGGGGTTCAACTATTCAACAATATGTTCACTGGTTCCATCCCTTCTTCCTTAGGTTTTTGTCCTTTACTTCAGTCCTTAGACTTAAGTAACAACTTGCTTACAGGTACAATCCCTCATAGCCTTGGCAATTCTACTAAGCTTTATTGGCTTAACTTGAGCTTCAATTCATTATCTGGTTCACTACCATCTAGCCTAACACACTCAGCTTCTATCACAGTCCTTTCTCTTCAACACAATAATCTTTCTGGCTCTATTCCTAACTCATGGGGTGGTATCCAACTCAGAGAGGTTTCTCTTAGTCATAACCAGTTTCGTGGAGCAATACCAAATGAGATAGGAAGACTTTCTAGGCTTAAGACAATAGATTTTTCTAATAATGCCTTGAATGGGAGCTTGCCTGCAACTCTCTCTAATTTATCCTTGCTCACTCTATTGAATGTAGAGAACAACCATCTTGGCAATCAAATCCCAGAAGCTTTAGGCAGATTACACAACCTTTCTGTTCTAATTTTGAGCAGAAACCAATTTATTAGCCATGTTCCTCAGAGTATTGGAAACATTTCCACACTTACACAGCTTGATTTGTCACTGAATAATCTCAGTGGAGAAATTCCGGTCTCTTTTGACAATTTGAGTAGTATGAATTTCTTCAATGTTTCTTATAACAACCTCTCTGGTCCAGTCCCCACCCTACTTGCCAAGAAATTTAACTCAAGCTCATTTTTAGGAAATATTCAACTATGTGGGTACAGCCCTTCAACTCCATGCCCTTCAGAAAATCCTTCTGAAGGACAAGGAATCATAGTTCCACCTGCTGAAAAATTAAAACACCAGCATCATAAGAAACTAGGCACCAAAGACATTATTCTCATAGCAGCAGGAGTGCTCCTGGCAGTCCTTATAACACTATGCTGCATCCTGATCTTCTGCCTGTCCAGAAGAAGATCAACATCAAATGCTGAGAGTGGCCAGGCTACAGGGAGGGCTGCTGCTACCAGCACTCAAAAGGGAGTCCCTCCGGCTGCCGGTGAAGTTGAAGCCGGTGGCGATGATAACGGAGGGAAACTAGTCCATTTTGATGGACCATTGGCTTTTACAGCTAATGATCTCTTGTGTGCAACAGCAGAGATAATGGGAAAGAGCACTTATGGAACTGTGTATAAGGCTACATTAGAGGATGGAAGTCAAGCTGCAGTGAAGAGATTGAGGGAGAAGATCACGAAAGGCCAGAGAGAATTTGAATCCGAAGTTAGCATTATCGGGAGAATTCGACACCCAAACCTTTTGGCACTAAGAGCCTATTACTTGGGACCAAAAGGAGAAAAGCTTTTGGTTTTTGATTACATGCCTAAAGGAAGCCTTGCTTCTTTCCTACATGCTGGTGGGTCTGAAACTAACATTGATTGGCCAACAAGGATGAAAATAGCACAGGACATAGCTCGTGGCTTGTTTTACCTTCACTCCCATGAGAACATAGTACATGGCAACCTTACATCCAGCAATGTTTTGCTTGATGAGAGTACAAATGCAAAAATCGCTGATTTTGGTCTGTCTCGGTTGATGACAACTGCTGCAAATTCTAACGTGATTGCAACCGCTGGAGCCTTAGGATACCGAGCACCCGAACTCTCAAAGCTGAAGAAAGCAAACACAAAAACTGATGTATACAGTCTTGGTGTTATCTTGTTAGAACTCCTAACGGGGAAGCCACCTGGCGAAGCGTTGAATGGTGTGGATTTACCTCAGTGGGTTGCCTCCATTGTGAAAGAGGAGTGGACAAATGAGGTTTTCGATGCGGAATTGATGAGAGATGCATCAACAAATGGTGATGAATTGCTAAACATGTTGAAGCTTGCTTTGCACTGTGTTGATCCTTCTCCATCAACACGACCGGAGGCTCACCAAGTTTTACAGCAGCTAGAAGAGATTAGACCAGAGGTAGATGTATCAGCCAGTTCTGGTGATGATTTTGCTATACCTTCAATCAGTGAATAA 2475 0.4222 MEYQTLTSKNFFYQNPLHILHHFSHKIMERHKWMIKPKNHFFVLCLLLLMFPVLGEEHWDGVIVTQSNLLALQAFKQELVDPKGFLRSWNDSGYGACNGSWVGIKCAQGQVIVLQLPWKGLKGHITNRIGQLQGLRKLSLHDNQIGGSIPTALGLLPNLRGVQLFNNMFTGSIPSSLGFCPLLQSLDLSNNLLTGTIPHSLGNSTKLYWLNLSFNSLSGSLPSSLTHSASITVLSLQHNNLSGSIPNSWGGIQLREVSLSHNQFRGAIPNEIGRLSRLKTIDFSNNALNGSLPATLSNLSLLTLLNVENNHLGNQIPEALGRLHNLSVLILSRNQFISHVPQSIGNISTLTQLDLSLNNLSGEIPVSFDNLSSMNFFNVSYNNLSGPVPTLLAKKFNSSSFLGNIQLCGYSPSTPCPSENPSEGQGIIVPPAEKLKHQHHKKLGTKDIILIAAGVLLAVLITLCCILIFCLSRRRSTSNAESGQATGRAAATSTQKGVPPAAGEVEAGGDDNGGKLVHFDGPLAFTANDLLCATAEIMGKSTYGTVYKATLEDGSQAAVKRLREKITKGQREFESEVSIIGRIRHPNLLALRAYYLGPKGEKLLVFDYMPKGSLASFLHAGGSETNIDWPTRMKIAQDIARGLFYLHSHENIVHGNLTSSNVLLDESTNAKIADFGLSRLMTTAANSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTGKPPGEALNGVDLPQWVASIVKEEWTNEVFDAELMRDASTNGDELLNMLKLALHCVDPSPSTRPEAHQVLQQLEEIRPEVDVSASSGDDFAIPSISE 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1394 824 Pfam Leucine rich repeat N-terminal domain 69 106 IPR013210 -
Lal18g1394 824 Gene3D Ribonuclease Inhibitor 68 221 IPR032675 -
Lal18g1394 824 Pfam Protein tyrosine and serine/threonine kinase 535 800 IPR001245 GO:0004672|GO:0006468
Lal18g1394 824 CDD STKc_IRAK 538 803 - -
Lal18g1394 824 ProSiteProfiles Protein kinase domain profile. 532 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1394 824 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 38 813 - -
Lal18g1394 824 SUPERFAMILY Protein kinase-like (PK-like) 536 805 IPR011009 -
Lal18g1394 824 Pfam Leucine rich repeat 182 241 IPR001611 GO:0005515
Lal18g1394 824 Pfam Leucine rich repeat 253 312 IPR001611 GO:0005515
Lal18g1394 824 MobiDBLite consensus disorder prediction 480 509 - -
Lal18g1394 824 SMART LRR_typ_2 180 204 IPR003591 -
Lal18g1394 824 SMART LRR_typ_2 275 298 IPR003591 -
Lal18g1394 824 SMART LRR_typ_2 323 347 IPR003591 -
Lal18g1394 824 SMART LRR_typ_2 132 156 IPR003591 -
Lal18g1394 824 SMART LRR_typ_2 299 322 IPR003591 -
Lal18g1394 824 MobiDBLite consensus disorder prediction 805 824 - -
Lal18g1394 824 Gene3D Ribonuclease Inhibitor 222 314 IPR032675 -
Lal18g1394 824 Gene3D Ribonuclease Inhibitor 315 416 IPR032675 -
Lal18g1394 824 Gene3D Phosphorylase Kinase; domain 1 538 609 - -
Lal18g1394 824 Gene3D Transferase(Phosphotransferase) domain 1 610 817 - -
Lal18g1394 824 SUPERFAMILY L domain-like 97 393 - -
Lal18g1394 824 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 38 813 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1394 Lal-Chr18 16204129 16207133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1394 59 805 Receptor kinase-like Gene Family AT3G51740 61.935 0.0 901
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal18g1394 PK_Tyr_Ser-Thr 4.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1394 - - gmx:100811174 1245.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0218 6 1447656 1451768 Lal18g1394 18 16204129 16207133 ECH
Lal18g1394 18 16204129 16207133 Lal18g1394 18 16204129 16207133 ECH
Lal18g1394 18 16204129 16207133 Lal6g0218 6 1447656 1451768 LSH
Lal17g1595 17 17334473 17337833 Lal18g1394 18 16204129 16207133 PCT
Lal18g1394 18 16204129 16207133 Lal17g1595 17 17334473 17337833 PCT