Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1373 ATGATGTGGACTGAACCACCCTTCTTCTCCACCGTCACCGTCACCATTGCCGCAGTATTAACCTTCTCTTTGTTATTACCATTATGCCATGCTCTGGGCTCTGCCACCAGCCTCGCCTTTATCGACGCCTCCGCCACCGTGTGCGGCATCGTGGCATCACAACCAACCGGACGCATTGAGTGCTACCGCCGTGGCCATGTTATCCCTGTCATCCCTGACGTTTCATTTTCCGCCATCTCCGGCGGAAGAAACTACTTCTGCGGTCTCAGGTCCGGTAACTACAGCTTACTTTGCTGGGACATTGTCTCTTCCAATGTTACCTTCGAAAGGAGAAGACTTTACCAAAATGACACTGTTCTATTCGAGAATCTCGCCGTTGGTGACACGCAAGTTTGCGCCACCGTTGTTGGTACCGGAACGGTGTCGTGCTGGAGAATCAATAGTGCGTTTGAATTGCCTTCTGGGTATGATCAATTTGCTTCTATTTCATCTGGGTCGGGTTTTTCTTGTGGAATTTTGAAGAATGGTTCTCGGGTTCGGTGTTGGGGTAATGGATCTATTGCTAGGAGAATAGAGGGTGAGTTTAGAAACATGTCTATGTTGAGTATTATAGCTGGTGAATCACATGTTTGTGGGTTGAATTCAAATGGGTTTTTGGTATGTAGAGGAAGTAATAGTTTTGGTCAAATTGATGTTCCGGAAGGAGGGTCTTTCGAGTATTCTGGGTTGGCTCTTGGAGCTGAACATAGCTGTGCTATTAGGAGATTGAATGGTTCTGTTCTTTGTTGGGGTGGTAGGGGATTGTTTTCAGTTAATTTTACACAAGGTGTTTCTTTTGAGACCATTGTTTCTGGCTCCAATTTTACTTGTGGATTGACAACAAACAATTTTTCTGTTATGTGTTGGGGTCCTGGTTGGTCTAACAGCGATAATTCTAGGTTTGTGCTTCCATTGTCTCCTATTCTTCCCGGGCCTTGTGTTCAATCTTCTTGTAGTGAGTGTGGTATATATCCTCAGTCTCAAATTTTGTGTTCTGGTCATGGTAACATTTGCAAGCCATGGCCTTGTTCACCTAAAATACCATTCCCAGCGACACCACCAGCGATACCACCATTGGTGCAGCCACCATCCTTAGCTCCTGCGCGGAGGTCGAAGGCATTGACAACTTACTTATTGTTCTTTGCCATTGTTGGATCAGTAGGAGCTTTTGCCGGCATTTGCACCGTAATTTATTGCTTCTGGACTGGTGTTTGTTTGGGGAAGAAGAAAGTCCATAATTCTGTGCAGCCAACAATTACTAGAGGTGGCAGTTCAAATGGTGGTGTTAATAGCCCTTCAAGATCATCCACTATTATACGTCAAACCTCGAGAATAATGCGGCGCCAGAGGAGTGGAACGTCATCAACAAAACATCCAGACAGGGCAGAGGAGTTCACCCTGGCTGAGCTTGCTGCGGCTACCAACAATTTCTCACTTGAGAACAAGATTGGTGCTGGAAGTTATGGTGTTGTGTATAGAGGCAAACTTGCCGATGGTAGTGAGGTGGCGATCAAGAGGGGTGACACTAGTACCAAGACGAAGAAGTTCCAAGAGAAAGAGAGTGCATTTGAGTCGGAATTAGCGTTTTTGTCCCGTCTGCACCACAAGCATTTGGTTAGGCTAGTTGGGTACTGTGAAGAGAAAGATGAAAGGCTCTTGGTGTATGAATACATGAAGAATGGGGCAATATATGATCATTTACATGACAAAAACAATGTGGACAGTAATAGTAGTGTCTTGAATTCTTGGAGAATGAGGATCAAAATCGCGTTGGATGCTTCACGAGGAATCGAATATCTTCATAATTATGCAGTTCCATCTATAATTCACAGAGATATCAAGTCCTCTAACATTCTGATCGATGCAAATTGGACGGCAAGAGTATCTGATTTTGGATTGTCATTGATGAGTCCAGATTCTGGTCATGATTACTGGCCTACCAAGGCTGCCGGAACGGTTGGATACATAGATCCTGAGTATTATGGTAGGAATGTTTTGACAGCAAAGAGTGATGTCTATGGGCTCGGAGTGGTACTGTTAGAACTCCTAACAGGAAAGAGAGCTATATTCAAGCATGGTGAGAATGAAGCCATCCCTGTGAGTGTTGTAGACTATGCTGTGCCTGCAATCGTGGGAGAAGAATTGTCGCAGATTTTGGACCCGAGGGTTGAACCACCAGAGTTGAATGAAACAGAAGCAGTGGAGCTGGTGGCCTATACTGCGATGCATTGTGTACATTTGGAAGGGAAGGATAGACCAACCATGGCTGACATTGTGGCCAATTTGGAGTGTGCTTTGACTCTTTGTGACACTTGTCATGGCAGCATTTCCAGCGCTACAATCTCTACCGTATCTGTCTGA 2400 0.4521 MMWTEPPFFSTVTVTIAAVLTFSLLLPLCHALGSATSLAFIDASATVCGIVASQPTGRIECYRRGHVIPVIPDVSFSAISGGRNYFCGLRSGNYSLLCWDIVSSNVTFERRRLYQNDTVLFENLAVGDTQVCATVVGTGTVSCWRINSAFELPSGYDQFASISSGSGFSCGILKNGSRVRCWGNGSIARRIEGEFRNMSMLSIIAGESHVCGLNSNGFLVCRGSNSFGQIDVPEGGSFEYSGLALGAEHSCAIRRLNGSVLCWGGRGLFSVNFTQGVSFETIVSGSNFTCGLTTNNFSVMCWGPGWSNSDNSRFVLPLSPILPGPCVQSSCSECGIYPQSQILCSGHGNICKPWPCSPKIPFPATPPAIPPLVQPPSLAPARRSKALTTYLLFFAIVGSVGAFAGICTVIYCFWTGVCLGKKKVHNSVQPTITRGGSSNGGVNSPSRSSTIIRQTSRIMRRQRSGTSSTKHPDRAEEFTLAELAAATNNFSLENKIGAGSYGVVYRGKLADGSEVAIKRGDTSTKTKKFQEKESAFESELAFLSRLHHKHLVRLVGYCEEKDERLLVYEYMKNGAIYDHLHDKNNVDSNSSVLNSWRMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILIDANWTARVSDFGLSLMSPDSGHDYWPTKAAGTVGYIDPEYYGRNVLTAKSDVYGLGVVLLELLTGKRAIFKHGENEAIPVSVVDYAVPAIVGEELSQILDPRVEPPELNETEAVELVAYTAMHCVHLEGKDRPTMADIVANLECALTLCDTCHGSISSATISTVSV 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1373 799 ProSiteProfiles Protein kinase domain profile. 490 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1373 799 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 8 795 - -
Lal18g1373 799 SUPERFAMILY Protein kinase-like (PK-like) 467 775 IPR011009 -
Lal18g1373 799 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 8 795 IPR044815 GO:0004674
Lal18g1373 799 Gene3D Phosphorylase Kinase; domain 1 450 570 - -
Lal18g1373 799 Gene3D Transferase(Phosphotransferase) domain 1 571 785 - -
Lal18g1373 799 SUPERFAMILY RCC1/BLIP-II 67 305 IPR009091 -
Lal18g1373 799 MobiDBLite consensus disorder prediction 431 465 - -
Lal18g1373 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Lal18g1373 799 ProSitePatterns Protein kinases ATP-binding region signature. 496 518 IPR017441 GO:0005524
Lal18g1373 799 MobiDBLite consensus disorder prediction 431 473 - -
Lal18g1373 799 Gene3D - 196 350 IPR009091 -
Lal18g1373 799 Gene3D - 31 191 IPR009091 -
Lal18g1373 799 SMART serkin_6 490 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1373 799 Pfam Protein kinase domain 491 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1373 Lal-Chr18 16062784 16065183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1373 11 798 Receptor kinase-like Gene Family AT3G55950 60.886 0.0 871
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lal18g1373 Pkinase 2.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1373 - - gmx:100798905 1165.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0236 6 1562697 1565090 Lal18g1373 18 16062784 16065183 ECH
Lal18g1373 18 16062784 16065183 Lal18g1373 18 16062784 16065183 ECH
Lal18g1373 18 16062784 16065183 Lal22g0222 22 1370747 1373164 LSH
Lal18g1373 18 16062784 16065183 Lal6g0236 6 1562697 1565090 LSH