Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1366 ATGGCCACAAATATCAAGGCTCATGAAAATAGGAAGCAGATATTTTCCAAGAATGCTGCATCAAGAGAGAACCCTTTCCAGCATCAACCAAAGCCAGCCACTGAGCCACCCCATGATATCACAGAACTTAGTGGTATCTTCACGAACTTGGCTACAATGGTTGCCCATCAAGGGGAACTAGCTATTAGGAGTGATAGTAGATATGAACCATGA 213 0.4366 MATNIKAHENRKQIFSKNAASRENPFQHQPKPATEPPHDITELSGIFTNLATMVAHQGELAIRSDSRYEP 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1366 70 MobiDBLite consensus disorder prediction 1 38 - -
Lal18g1366 70 SUPERFAMILY t-snare proteins 38 61 IPR010989 GO:0016020|GO:0016192
Lal18g1366 70 PANTHER SYNTAXIN 3 37 IPR045242 -
Lal18g1366 70 PANTHER SYNTAXIN 40 66 IPR045242 -
Lal18g1366 70 PANTHER SYNTAXIN-31 3 37 - -
Lal18g1366 70 PANTHER SYNTAXIN-31 40 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1366 Lal-Chr18 16017589 16019559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1366 40 69 SNARE and Associated Proteins AT5G05760 70.000 1.47e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1366 K08490 - gmx:100777383 67.3958