Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1365 ATGGCACCAAAAGCTACAAAAGCCGAGAAGAAAATCGCTTATGATGGCAAGCTATGTCAGCTTCTTGATGAGTACACTCAGATTCTGGTTGTGAACGCTGATAATGTTGGATCCAATCAGCTCCAGAACATTCGTCAGGGTTTACGTGGTGATTCTGTTGTTTTGATGGGAAAGAACACTATGATGAAACGTTCTGTTAGGATTCATGCTGAGAAGACTGGAAACCAAGCTTTCCTTAACCTAATCCCTCTTCTTGTCGGAAATGTTGGGTTGATTTTCACCAAGGGTGACTTGAAGGAGGTTAGCGAGGAAGTTGCTAAGTACAAGGTGGGAGCTCCTGCTCGTGTTGGTTTGGTTGCCCCAATTGACGTCGTTGTTCCTCCTGGCAACACAGGACTCGACCCCTCTCAAACCTCTTTCTTCCAGGTTCTTAACATTCCCACCAAGATTAACAAGGGTACTGTTGAAATTATTACACCTGTGGAACTCATTAAGAAGGGAGACAAGGTGGGCTCTTCTGAAGCTGCATTGCTTGCAAAGCTTGGCATAAGGCCATTCTCATATGGGCTAGTGGTCCTTTCTGTTTATGATAATGGTTCTGTCTTCAATCCTGAGGTTCTTGATCTCACTGAAGATGATCTCCTTGAGAAGTTTGCTATTGGAGTCTCCCAAGTTACTTCTCTGTCATTGGCCATTTCATACCCAACCCTTGCTGCTGCACCACACATGTTTGTCAATGCCTATAAGAATGTTCTGTCTGTGGCTGTTGCAACAGAATATTCTTTCCCACAGGCAGATGAAGTTAAGGAGTACTTGAAGGATCCAAGCAAATTTGCTGCTGTAGTTGCTGCTGCACCTGTTGCAGATTCCGGAGCTGCTCCAGCTGCTGCTGCCAAGCCCGAGAAGGAGGAAGAGCCAGCTGAAGAATCAGATGATGATATTGGCTTCGGTCTATTTGACGAATAG 966 0.4534 MAPKATKAEKKIAYDGKLCQLLDEYTQILVVNADNVGSNQLQNIRQGLRGDSVVLMGKNTMMKRSVRIHAEKTGNQAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFNPEVLDLTEDDLLEKFAIGVSQVTSLSLAISYPTLAAAPHMFVNAYKNVLSVAVATEYSFPQADEVKEYLKDPSKFAAVVAAAPVADSGAAPAAAAKPEKEEEPAEESDDDIGFGLFDE 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1365 321 Pfam 60s Acidic ribosomal protein 234 319 - -
Lal18g1365 321 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 320 - -
Lal18g1365 321 Pfam Ribosomal protein L10 8 108 IPR001790 -
Lal18g1365 321 SUPERFAMILY Ribosomal protein L10-like 8 134 IPR043141 -
Lal18g1365 321 PIRSF L10E 1 320 IPR030670 GO:0042254
Lal18g1365 321 MobiDBLite consensus disorder prediction 305 321 - -
Lal18g1365 321 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-1 1 320 - -
Lal18g1365 321 Gene3D - 114 185 IPR043164 -
Lal18g1365 321 CDD Ribosomal_P0_L10e 9 185 - -
Lal18g1365 321 MobiDBLite consensus disorder prediction 290 321 - -
Lal18g1365 321 Pfam Insertion domain in 60S ribosomal protein L10P 114 183 IPR040637 -
Lal18g1365 321 Gene3D - 6 209 IPR043141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1365 Lal-Chr18 16014035 16016439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1365 1 319 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 85.266 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1365 K02941 - dcr:108192350 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0246 6 1601011 1603402 Lal18g1365 18 16014035 16016439 ECH
Lal18g1365 18 16014035 16016439 Lal18g1365 18 16014035 16016439 ECH
Lal5g1130 5 14034099 14038318 Lal18g1365 18 16014035 16016439 LSH