Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1360 ATGCTTCCTTCTGCAGCGACCACCTTGGTCTCAAAATCCACTATCTTCCCACACCAAAAATCCACCCTTGGTTACCTTAAACTCTCTGTTTCAGACCTTCCTATGCTTTCTTGCCACTACATACAAAAAGGTTGTCTCTTTACTCAACCTTCTATTCCTTCCCACACTCTCATCCAACTTCTCAAATCTGCACTCTCTCACACCCTCTCTCTCTTCCCTCCCCTCGCTGGTCGTTTAACCACTGATTCTAACGGTTACATTTACATCACTTGCAACGATGCTGGCGTTGATTTCCTTCATGTTAATGCTACTTCTTATAAAATCTGTGACCTTTTGTCTTCACTTGATATCTCTCCGTTGTTCAAAGAATTCTTCACCTTCGATAGGATGGTTAGTTATAATGGCCATTCTTCACCCCTTCTCGCTGTTCAGGTTACTGAACTTTCTGACGGCGTTTTCATTGGCTGCGCTGTTAATCACGCCGTCACTGATGGAACCTCTCTCTGGAACTTCTTTAACACTTTTGCTCAAGTATGCAGAGGAGCTAGTAAGGGAATGAATAAGGTTCCTGATTTCACCCGAGAATCCGTACTGATTTCTAACGCCGTTCTCCGGTTGCCGGAAGGTGGTCCTAAAGTAACGTTCGACGCTGATGCGCCGTTACGGGAGAGAATCTTCAGCTTCAGCCGCGAATCTATTCAGAAACTGAAAGCAAGAGTTAATTGTAGAAAATGGACGGAGGATAACGGTGTTGAATTGATGATGAAAAACAGCAATGATTATCAACAGAAAGAGAATAACAAGGCTTCGACAATTTTTGAGAACTGGTTTCTCAGAAACGCAGGTAATTCGAAACCGTTAATCACTGATGAAACGGTTGAGATTTCGTCGTTTCAGTCTCTCTGCGCTTTGCTGTGGCGTGCGGTGACACGCGCGAGGAAGTTGCAGGCGTCGAAAACGACGACGTTTAGAATGGCGGTTAACTGTCGCCACCGGATAGAACCGAAAATGGAAAGTTACTACTTCGGTAACGCGATTCAGAGCGTTCCAACTTATGCTTCAGCTGGTGAGGTATTGTCTAAGGATCTACGGTGGTGCGCGGAGCAATTGAACAAGAACGTGAGGGCGCACGATAATTCTATGGTACGGAAGTTCGTAGAGGATTGGGAAAAGAATCCAAGGGTGTTCCCGTTGGGAAACCCTGACGGTGCATCAATCACGATGGGTTCCTCACCAAGATTCCCAATGTATGATAATGATTTTAGGTGGGGAAGGCCATTGGCGGTGCGGAGTGGAAGGGCAAATAAATTTGACGGTAAGATCTCTGCGTTTCCGGGTAGAGATGGAAGCGGAACCGTTGATTTGGAGGTGGTTTTGGCGCCGGAAACAATGGCGGGGCTTGAGTCTGATCCTGAGTTCATGGTTTACGCTACCAGTCAATTATAG 1446 0.4606 MLPSAATTLVSKSTIFPHQKSTLGYLKLSVSDLPMLSCHYIQKGCLFTQPSIPSHTLIQLLKSALSHTLSLFPPLAGRLTTDSNGYIYITCNDAGVDFLHVNATSYKICDLLSSLDISPLFKEFFTFDRMVSYNGHSSPLLAVQVTELSDGVFIGCAVNHAVTDGTSLWNFFNTFAQVCRGASKGMNKVPDFTRESVLISNAVLRLPEGGPKVTFDADAPLRERIFSFSRESIQKLKARVNCRKWTEDNGVELMMKNSNDYQQKENNKASTIFENWFLRNAGNSKPLITDETVEISSFQSLCALLWRAVTRARKLQASKTTTFRMAVNCRHRIEPKMESYYFGNAIQSVPTYASAGEVLSKDLRWCAEQLNKNVRAHDNSMVRKFVEDWEKNPRVFPLGNPDGASITMGSSPRFPMYDNDFRWGRPLAVRSGRANKFDGKISAFPGRDGSGTVDLEVVLAPETMAGLESDPEFMVYATSQL 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1360 481 Gene3D - 220 471 IPR023213 -
Lal18g1360 481 Pfam Transferase family 8 474 - -
Lal18g1360 481 SUPERFAMILY CoA-dependent acyltransferases 37 187 - -
Lal18g1360 481 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 476 - -
Lal18g1360 481 Gene3D - 6 203 IPR023213 -
Lal18g1360 481 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 7 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1360 Lal-Chr18 15974585 15976030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1360 59 468 Monolignol Biosynthesis Gene Families AT5G48930 28.640 8.82e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1360 - - vun:114195488 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1360 18 15974585 15976030 Lal18g1360 18 15974585 15976030 ECH
Lal3g0580 3 4381622 4383001 Lal18g1360 18 15974585 15976030 LSH
Lal18g1360 18 15974585 15976030 Lal22g0239 22 1479815 1481257 LSH
Lal5g1136 5 14090211 14091539 Lal18g1360 18 15974585 15976030 PCT
Lal18g1360 18 15974585 15976030 Lal3g0580 3 4381622 4383001 PCT
Lal18g1360 18 15974585 15976030 Lal18g1360 18 15974585 15976030 PCT
Lal22g0239 22 1479815 1481257 Lal18g1360 18 15974585 15976030 PCT