Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1358 ATGTCTGATGCTTTGATCAATGGGTTGGCTGGAGCTGGAGGAGGAATCATTGCTCAACTCATCACTTACCCTCTTCAAACTGTAAATACTCGTCAACAAACTGAACGTGATCCAAAGAAAGAGAACAAGAATCTGGGAACTCTTCAGCAAATGTCTCAGGTTGTGAAACACGAAGGGTGGGAGCGTTTGTATGGAGGTTTAACACCATCGCTAATTGGTACAGCTACATCTCAGGGTGTTTACTATTATTTCTATCAAATCTTCAGGCACAAAGCTGAAGTAGCTGCACTTCAACAGAAAAGGCTAGGCTTTGGTGACGGATCAGTTGGGATGCTCTCCTCACTTATTGTTGCTGCTTTATCTGGGTGTGTTAATGTGCTCTTGACAAATCCCATATGGTTAGTTGTGACTCGCATGCAGACACATAGAAAAGAGTCAAGCAAAGCGCTCTCTGGTCAGAAGTTGTCAGATGCCACCGATCAAACAACGCTTTCTGCAGTTGAACGTCCTCCATATGGAACTAGCAATGTGGTTCAAGAAGTCTATCAAGAAGCTGGAGTTTTGGGTTTCTGGAAAGGTGTATTACCAACACTGATCATGGTAAGCAACCCTTCGATACAGTTCATGCTGTATGAAACCATATTGACGAAGTTAAAAAAAAGACGTGCTCAGAATAAGAAGGGGGGCAATGGGGTAACTGCATTGGAGATATTTCTTCTTGGAGCGGTGGCTAAGCTTGGAGCTACTGTTGTAACTTATCCTCTCCTAGTTGTGAAGTCTAGGCTTCAAGCTAGACAGGCCAAAGATGGAGACAAGAAACAACAGTATAAAGGCACATTGGATGCTATTCTTAAGATGATCCGCTACGAAGGGTTCTATGGATTTTACAAAGGCATGGGTACAAAAATTGTACAAAGTGTGCTGGCTGCGGCGGTTTTGTTCATGGTGAAGGAAGAACTAGTTAATCAGATTCGTTCCTTGCTGGCTAAGGGTGCTTCCAACAATGTAAAGCCAAAGCTTGTGTGA 1026 0.4337 MSDALINGLAGAGGGIIAQLITYPLQTVNTRQQTERDPKKENKNLGTLQQMSQVVKHEGWERLYGGLTPSLIGTATSQGVYYYFYQIFRHKAEVAALQQKRLGFGDGSVGMLSSLIVAALSGCVNVLLTNPIWLVVTRMQTHRKESSKALSGQKLSDATDQTTLSAVERPPYGTSNVVQEVYQEAGVLGFWKGVLPTLIMVSNPSIQFMLYETILTKLKKRRAQNKKGGNGVTALEIFLLGAVAKLGATVVTYPLLVVKSRLQARQAKDGDKKQQYKGTLDAILKMIRYEGFYGFYKGMGTKIVQSVLAAAVLFMVKEELVNQIRSLLAKGASNNVKPKLV 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1358 341 PANTHER PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER 1 339 - -
Lal18g1358 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 232 323 IPR018108 -
Lal18g1358 341 Pfam Mitochondrial carrier protein 233 322 IPR018108 -
Lal18g1358 341 Pfam Mitochondrial carrier protein 7 90 IPR018108 -
Lal18g1358 341 Pfam Mitochondrial carrier protein 109 221 IPR018108 -
Lal18g1358 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 217 IPR018108 -
Lal18g1358 341 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 339 IPR044712 GO:0006862|GO:0055085
Lal18g1358 341 Gene3D Mitochondrial carrier domain 6 330 IPR023395 -
Lal18g1358 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 91 IPR018108 -
Lal18g1358 341 SUPERFAMILY Mitochondrial carrier 3 319 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1358 Lal-Chr18 15959616 15964041 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1358 24 326 Chloroplast and Mitochondria Gene Families AT2G47490 29.355 1.41e-32 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1358 K13354 - gmx:100775784 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1358 18 15959616 15964041 Lal18g1358 18 15959616 15964041 ECH