Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1332 ATGAACTTGAATCATGAAATACCAGAGGCCGTAGATGAAATTGATGTTAGTGAAGATGAAAATATTAATGAAGTAGAAGAGTTTGATTTTGAAGAAATTGACTTTGGATCATTAAACGAAGATGAAGTAAAAAAATATAGGTTTGCAAACAATGATATTGCATATAATTTTTATAAGATGTATGCTATGAAGAAAGGATTTGGCATTAGAAAATATCATACCCGTCGGGACAAGGATGATGAAATTTTATGGCAATCATATTTTTGTGATAGAGAGGGATTTAGAGATAAGAAAAATGAATTAGTTCGAAAAAGGGCTCCAAGAAAAGAAACGAGATGTGGTTGTTTAGCAAGAATGAAAATTCACATTGACAAGGAGAAAGGTGATTGGTATGTTAGTTTTTTTGTTGATGATCATAATCATGAATTGGTTGGCGAACATTACGGTGGGATGATAGCGTCAAACCGAAGTATGACAGAAACAGACATCGCTTTGATGAACACAATGAGAGAAGTCGGAATTGGAACAGGCAAAATTTTTGGTTCATTCGCCGGTCAATCTGGTGGATATCGGTATATTGGATTCTCTAAGAAAGATATGTATAATCAAATTCAGAGACAAAGAATAATAGGAAATGGTGACGCAGAATCATCATTACAATACCTGAAGGAACAATCAAAATCAGATTCTGCAATGTACTGGAGACATAGTGTAGATGAAGAAGGTAAGTTGCAACAATTATTTTGGGCGGATGGATGCAACATTTTTGACTACTCAATTTTTGGAGATGTTCTAGCTTTTGATGCAACCTATGGTCGAAACAAGTACAAGTTTCCGGTGGTCATTTTTTCTGGTGTGAACCATCACAAGCAAACAACTGTATTTGCTGCTGGTATTGTGGCCAACGAGACAGAGGAAACGTATGTTTGGCTTTTGGGAAATTTCTTGGAGGCAATGAATGGGAAACATCCAAAGTGTGTTATCACTGATGGTGACTTGTCGATGAAAAATGCAATCAAAAGAATTTTCCCTGCAACTCATCATAGACTATGTGCTTGA 1059 0.3569 MNLNHEIPEAVDEIDVSEDENINEVEEFDFEEIDFGSLNEDEVKKYRFANNDIAYNFYKMYAMKKGFGIRKYHTRRDKDDEILWQSYFCDREGFRDKKNELVRKRAPRKETRCGCLARMKIHIDKEKGDWYVSFFVDDHNHELVGEHYGGMIASNRSMTETDIALMNTMREVGIGTGKIFGSFAGQSGGYRYIGFSKKDMYNQIQRQRIIGNGDAESSLQYLKEQSKSDSAMYWRHSVDEEGKLQQLFWADGCNIFDYSIFGDVLAFDATYGRNKYKFPVVIFSGVNHHKQTTVFAAGIVANETEETYVWLLGNFLEAMNGKHPKCVITDGDLSMKNAIKRIFPATHHRLCA 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1332 352 Pfam MULE transposase domain 264 351 IPR018289 -
Lal18g1332 352 Pfam FAR1 DNA-binding domain 56 144 IPR004330 -
Lal18g1332 352 PANTHER OS02G0262500 PROTEIN 44 351 - -
Lal18g1332 352 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 44 351 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1332 Lal-Chr18 15795434 15796572 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal18g1332 FAR1 5.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1332 - - lang:109327968 540.421