Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1329 ATGGCTGATGCAATTGATTTGACTGGTGATGGAGGAGTCATCAAGACCACTGTGAGAAAAAGCAAGCCTGATGCTGTGGCTCCAACTGAAGATTTCCCTGTTGCTGATGGTAATGCTTTTTACAGTAGTGTTAAGACTTTAGTACATTATGAAGGCACGCTTGCTGATACTGGAGAAGTATTTGACACTACACATGAAGATAACACTATCTTCTCTTTTGAGGTTGGAAAAGGCAGTGTTATCAAGGCTTGGGACATTGCAGTAAAGACCATGAAGGTCGGAGAAATCGCAAAAATAACATGCAAGCCAGAATATGCATATGGTAGTGCGGGATCCCCACCAGATATTCCCCCAGATGCGACGCTTATTTTTGAAGTTGAGCTAGTTGCCTGTAAGCCCAGGAAGGGCTCCAGCCTGGGAAGTGTTTCAGAGGAGAGGGCTAGGCTAGATGAGCTGAAGAAGCAAAGAGAGATAGCTGCTGCTGCCAAAGAGGAGGAGAAGAAGAAGAGAGAAGAAGCAAAAGCAGCCGCGGCTGCTCGTGTGCAAGCCAAGTTAGATGCCAAGAAAGGGAAGGGTAAAGGTAAATCAAAGTAG 594 0.4579 MADAIDLTGDGGVIKTTVRKSKPDAVAPTEDFPVADGNAFYSSVKTLVHYEGTLADTGEVFDTTHEDNTIFSFEVGKGSVIKAWDIAVKTMKVGEIAKITCKPEYAYGSAGSPPDIPPDATLIFEVELVACKPRKGSSLGSVSEERARLDELKKQREIAAAAKEEEKKKREEAKAAAAARVQAKLDAKKGKGKGKSK 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1329 197 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-1 1 197 - -
Lal18g1329 197 Gene3D - 2 131 IPR046357 GO:0003755
Lal18g1329 197 MobiDBLite consensus disorder prediction 162 177 - -
Lal18g1329 197 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 48 129 IPR001179 GO:0003755
Lal18g1329 197 SUPERFAMILY FKBP-like 42 135 - -
Lal18g1329 197 MobiDBLite consensus disorder prediction 162 197 - -
Lal18g1329 197 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 197 - -
Lal18g1329 197 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 43 132 IPR001179 GO:0003755
Lal18g1329 197 Coils Coil 142 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1329 Lal-Chr18 15774023 15775750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1329 52 166 Calmodulin-binding Proteins AT5G48570 37.500 2.02e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1329 K01802 - gmx:100500018 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1329 18 15774023 15775750 Lal18g1329 18 15774023 15775750 ECH