Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1308 ATGAACTCTATTCTCTCCATTTTCTTCTTCTTATTTGTCATTGCCGGCGCCGACGACTTAGCTTCCGACAGAGCCGCTCTCGTAGCCCTACGCGCCGCCGTGCGTGGCCGTTTAATCCTATGGAACCTGAACCAAACAGACCCTTGTTCATGGGACGGTGTGTTCTGCAACGAAAACCGGGTCACAAAGATGCGGTTTCCGGGTATGGGTCTCTCTGGGAATCTTCCTTTGGGTTTAGGGAACCTTACTCAGTTACAAACCCTTTCTTTAAGGGTAAATGCGTTAACGGGTACAATTCCCTCTGATTTCGTTAACCTTGTTAACTTGAGGAATCTTTTTCTTCATGATAACTTTTTCTCTGGTGAAATTCCTGATTTTGTGTTCAATATGCAGAATTTGATGAGGTTGAGTTTGGGTGATAACAATTTCAGTGGTGAGATCTCACCAAAGTTTAATAACCTTACTCGTTTGGGTTCTCTTCTTTTGGAGAATAACCATTTCACTGGGTCAATTCCTGACCTTAATGTTCCACTTCTTCGGGAATTCAATGTTTCAAATAATCACTTAAATGGGTCTATTCCTAAGAGATTTTCACAGTTGGATGAAAGTGCTTTTGCTGGGAATTCACTTTGTGGAAAGCCCTTGCAATCTTGCCCTGGAACTGAAGGTGGAACAAAGAAATTGTCCGGGGGCGCAATTGCGGGAATTGTGATCGGTTCTTTCTTTGGTTTGTTGTTGATTCTCTCGATTGCGATCTTAGTGTGTAGAAAAATGGGTGGTAGAAGAGATTCCAACGGCGTTGCGCCTGCAAAGCATGTTGAGGCTGTGGCACCGCGTGAGAGGAGCAGTGATGATAGTGGGAGTAATACTAATGCTAGTCCTAGTAACTCAGCTGTTGTAGCAGCACAATTGGGTGGTAAGAATAGTAAAAATTTGGTATTTTTCGGGAATGTGATTAAGCCTTTTGATCTTGAGGAATTACTGAGGGCTTCAGCTGAAGTGTTGGGGAAGGGGACTTTCGGAACAACTTATAAGGCTACTATGGATTCGGGGGTGAGCGTGGCGGTGAAGAGGTTGAGGGATTTTATTACTCTGGAAAAAGAATTCAGAGAGAAAATTGATCAAGTGGGGAAGATGGCTCATGAGAATTTGGTCCCACTCAGGGGTTATTATTTTAGCCGGGACGAAAAACTACTTGTGTATGATTACATGCCAAATGGAAGCTTATCTGCCCTCTTACATGATAGTGGAGCTGGCAGGACTCCACTGCATTGGGAAGCAAGATCTGCCATTGCCCTTGGTGCTGCTCGCGGAATTGCATACCTACATTCACATGGCCCGACATCCTCCCATGGAAATATAAAGTCATCAAATATTCTTCTCACCAAATCCTACGAAGCCCGTGTCTCCGACTTTGGCCTTGCTTATCTTGCACTCCCAACCTCTACACCTAACCGTGTCTCTGGTTACCGTGCCCCAGAAGTCACAGATGCTCGCAAAGTATCCCAACAAGCAGATGTCTATAGCTTCGGCATAACTCTTTTGGAGCTGCTTACAGGGAAGGCTCCTAGTCACTCTTCACTTAACGAAGAAGGGGTAGACCTCCCAAGATGGGTTCAATCTGTGGTTCAGGAGGAGTGGAACAACGAGGTTTTTGACGTGGAGCTTCGCAAATACCAAAATGTTGAGGAGGAAATGGTCAAGCTGTTGCAGCTCGCAGTTGAATGTACTGCTCAATTTCCCGACAAGAGACCTTCCATGGATGTGGTCGCAAACCGAATTCAGGAAATTTATAATGTGAGCATAGAGAAGGAGGGAGTTTCCCAACAGTACTACTATAGTGTGCCACAAGCTTGA 1857 0.4507 MNSILSIFFFLFVIAGADDLASDRAALVALRAAVRGRLILWNLNQTDPCSWDGVFCNENRVTKMRFPGMGLSGNLPLGLGNLTQLQTLSLRVNALTGTIPSDFVNLVNLRNLFLHDNFFSGEIPDFVFNMQNLMRLSLGDNNFSGEISPKFNNLTRLGSLLLENNHFTGSIPDLNVPLLREFNVSNNHLNGSIPKRFSQLDESAFAGNSLCGKPLQSCPGTEGGTKKLSGGAIAGIVIGSFFGLLLILSIAILVCRKMGGRRDSNGVAPAKHVEAVAPRERSSDDSGSNTNASPSNSAVVAAQLGGKNSKNLVFFGNVIKPFDLEELLRASAEVLGKGTFGTTYKATMDSGVSVAVKRLRDFITLEKEFREKIDQVGKMAHENLVPLRGYYFSRDEKLLVYDYMPNGSLSALLHDSGAGRTPLHWEARSAIALGAARGIAYLHSHGPTSSHGNIKSSNILLTKSYEARVSDFGLAYLALPTSTPNRVSGYRAPEVTDARKVSQQADVYSFGITLLELLTGKAPSHSSLNEEGVDLPRWVQSVVQEEWNNEVFDVELRKYQNVEEEMVKLLQLAVECTAQFPDKRPSMDVVANRIQEIYNVSIEKEGVSQQYYYSVPQA 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1308 618 Gene3D Transferase(Phosphotransferase) domain 1 404 613 - -
Lal18g1308 618 Gene3D Ribonuclease Inhibitor 20 175 IPR032675 -
Lal18g1308 618 CDD STKc_IRAK 335 597 - -
Lal18g1308 618 ProSiteProfiles Protein kinase domain profile. 329 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1308 618 SUPERFAMILY Protein kinase-like (PK-like) 333 593 IPR011009 -
Lal18g1308 618 Gene3D Phosphorylase Kinase; domain 1 295 403 - -
Lal18g1308 618 SUPERFAMILY L domain-like 41 200 - -
Lal18g1308 618 PANTHER INACTIVE RECEPTOR KINASE-RELATED 4 602 - -
Lal18g1308 618 Coils Coil 559 579 - -
Lal18g1308 618 MobiDBLite consensus disorder prediction 263 295 - -
Lal18g1308 618 Pfam Leucine rich repeat N-terminal domain 21 57 IPR013210 -
Lal18g1308 618 Gene3D Ribonuclease Inhibitor 176 222 IPR032675 -
Lal18g1308 618 PANTHER OS05G0588300 PROTEIN 4 602 - -
Lal18g1308 618 Pfam Protein kinase domain 332 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1308 618 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1308 Lal-Chr18 15605116 15608217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1308 19 597 Receptor kinase-like Gene Family AT1G48480 55.882 0.0 670
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal18g1308 Pkinase 4.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1308 - - aprc:113846223 785.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1308 18 15605116 15608217 Lal22g0283 22 1797929 1801162 LSH
Lal18g1308 18 15605116 15608217 Lal6g0306 6 1961180 1964723 LSH