Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1307 ATGGATAAGACCAAAATTTTAGCATTAGTAGGAGGAAGTGCTCTTTTGGGTTCTGTTTCTACTTACTTTCTTCTAACAAGGATTCTTCAAAGAGATTTGCGGCAATGCAGTAAGAGTGGTACTAACTTAAATGGTGTTGAAGGATGCACTGTTGGTGTAAGGAAGAATGATAAGATAGTTAACGATGATCTTCTGAAAGATGAGATTGTTTCTGAGCATCTCACTAGGAACATTCAGTTTTTTGGATTTGAGTCTCAGAAGAAAGTGAGTGCATCATATGTTGTGGTTATTGGTCTTGGAGGGGTCGGCAGTCATGCTGCAAATATGCTCTTGAGGTCAGGGATTGGCAAGCTTCTTCTTGTGGACTTTGACCAGGTTTCTCTTTCATCACTAAATCGACACGCTGTTGCGACAAGAGCAGATGTTGGCATCCCAAAAGCTCAGTGCCTTAAGGAGCACTTTTTATCTATCTTTCCGGAGTGCCAAATTGATGCAAAAGTGATGTTATATGATTCATCTACTGAAGAAGAAATTCTCTCAGGCCACCCTGACTTCGTTTTGGATTGTATTGATAACATTGATACAAAGGTGGCACTTCTTGCTGCATGTGTACGTAGGGGTTTGAAGGTTCTATCTGCTACTGGGGCTGGTGCCAGAGCTGATCCGACAAGGATACGCATTGCTGATCTAAGAGAATCAACTAATGACCCGTTATCTCGATCTGTAAGACACCGTTTGAGGAAAGATTATGGCATTGAAGGCGGCATCCCCGTTGTGTTTTCTTTGGAAAAACCCAAAGCTAAGCTGCTTCCATTTAAGGGCCCCAGTGGAGAAGAGGAAAACCCTTCAGATTACCAGATAGTACCAGGTTTTAGGGTCCGTATCATACCTGTCCTAGGCACCATCCCTGCAATATTTGGACAGGTTATGGCATCCTATGTTGTGACACAATTAGCAGGATTGCAAGTTCAAACAGAACCTATAGTCAATTTTGACATGGATCATTATCATACTCTTCATCAACGCCTTATTGAGCACGAGGAGTTATTGTTCGGAACATCCACGGAAGTGCAGGTAGATGTTGAAGAGGTGATGTATATTGTTAAAGAATTATGGCATGGAAGAAGTGCTAGAGAGCAGCTAGTGAAAGATGTTGGACGTGGAATGTGGCGATCAGTTAATGAATTAATGCTCGTAAGGTGGGACTGCACAAAGCCGGCGTCTATTTCCAATCTAATTCTTTTGAAATTCAAAGAGGTGGATGAGCACGAGTCGACGACATTGGATGATATAAAGGAAAACGAACCGGAGTTTTACAATAGAGTAACGTCTGTGTTAAAACGAGCCGAACTCGACTTTGGATTGTGA 1368 0.4218 MDKTKILALVGGSALLGSVSTYFLLTRILQRDLRQCSKSGTNLNGVEGCTVGVRKNDKIVNDDLLKDEIVSEHLTRNIQFFGFESQKKVSASYVVVIGLGGVGSHAANMLLRSGIGKLLLVDFDQVSLSSLNRHAVATRADVGIPKAQCLKEHFLSIFPECQIDAKVMLYDSSTEEEILSGHPDFVLDCIDNIDTKVALLAACVRRGLKVLSATGAGARADPTRIRIADLRESTNDPLSRSVRHRLRKDYGIEGGIPVVFSLEKPKAKLLPFKGPSGEEENPSDYQIVPGFRVRIIPVLGTIPAIFGQVMASYVVTQLAGLQVQTEPIVNFDMDHYHTLHQRLIEHEELLFGTSTEVQVDVEEVMYIVKELWHGRSAREQLVKDVGRGMWRSVNELMLVRWDCTKPASISNLILLKFKEVDEHESTTLDDIKENEPEFYNRVTSVLKRAELDFGL 455
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1307 455 CDD YgdL_like 81 315 - -
Lal18g1307 455 Gene3D - 65 331 - -
Lal18g1307 455 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 73 332 IPR035985 GO:0008641
Lal18g1307 455 Pfam ThiF family 75 333 IPR000594 -
Lal18g1307 455 PANTHER TRNA THREONYLCARBAMOYLADENOSINE DEHYDRATASE 1-RELATED 6 453 - -
Lal18g1307 455 PANTHER TRNA THREONYLCARBAMOYLADENOSINE DEHYDRATASE 6 453 IPR045886 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal18g1307 Lal-Chr18 15594350 15602996 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1307 115 217 Sulfurtransferasese or Rhodanese AT5G55130 29.126 7.70e-06 46.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1307 K22132 - gmx:100815445 791.186