Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1304 ATGTCGTTACTTTCCTTCATCTTTCTCCCTTTCACGCTTTTCTTCTTTATCAATGACGTAACTATAACTGCTACTACTGACTTTGACTTCGGAACTTTAACCTTAAGCAGCCTTAAGCTTCTCGGCGATGCCCATTTGAAAAATGGCACCATCAGCCTCACGCGCGACCTCGCCGTTCCAAATTCCGGCGCTGGAAGAGCCCTGTATTCAATTCCGATACGGTTCCGGCAACCTGGAGCGTATTCTCCGGCGAGCTTCTCCACCTTCTTCTCCTTCTCCGTTATCAACCTCAACCCATCCTCCATTGGCGGCGGACTTGCATTCCTCCTCTCGCCGGACGATGAATCCATTGGAGACGCCGGCGGATTCCTCGGCCTCGGAGGTGGCGGAAGTTTCGTCGCTGTGGAGTTTGACACCCTGATGGATGTGGAATTCAAAGACACTAATGGAAACCATGTTGGGGTGAACCTTAACACGATGGTTTCATCCGAATTTTGTGACTTGGGTGAGATTGGAATCGATCTCAAAACTGGGAACACGGTGAATGCGTGGATTGAGTTTGATGGATTCACAAAAGGGTTAAGCGTGTGGGTTTCGTATTCGAATCTGAAACCGAAAGAACCGATTTTGACTTTGAATCTCGACGTGGATCAGTTTTTCAATGATTTTATGTATGTGGGGTTCTCTGGTTCTACACAAGGAAGCACAGAAGTTCACAATGTTGAGTGGTGGAGCTTTAGTTCTTCTTTTGACTTATTGGCTGTGGCGGTGGCACCACCACCTCCGGTGGTGAGTTTGATGAACCCGAGCGCCAATTCGATAAAGCCGACGCCGCCTTCTTTGGCGCCTTCAGCTCCATCCAATGCTCAACAAAAGGATAGTAAGTCTTCTTGCCATAATGGACTATGCAAAGAAGGTTTAGGTGCAGTTGCTGGGGTTGTGAGTGCTGGGGCTTTTGTTTTGGCTCTTTTTGCAGGTGCATTGATTTGGGTTTATTCTAAAAAGTTCAAGCATGTAGAGAAGTTGGGTTCAGTAGGATCAGAGTATATCAAAATGCCTAAACAGTTTAGTTGTAAGGAGCTTAAAGCAGCTACTAAGTGCTTCAATGCCAATAGGATAATTGGTCATGGTGCATTTGGGACTGTGTATAAGGGCATTTTGCCTGAAAATGGGGACATTGTTGCGGTGAAGAGATGTGGACATAGTGGTCAGGGTAAGAATGAGTTTTTGTCCGAGTTATCCATAATTGGGACTCTTAGACATCGGAATCTTGTCCGCCTTCAGGGTTGGTGCCATGAGAAAGGTGAGATTTTATTGGTGTATGACTTGATGCCTAATGGAAGTTTAGATAAGGCTTTGTTTGAGGCTAGAACACCGCTGCCTTGGTCTCACAGGCGCAAGATTTTGTTAGGCGTTGCATCTGCGTTAGCCTACTTGCACCAGGAATGTGAGAATCAGGTAATTCACAGGGACATTAAGACTAGTAACATTATGTTGGATGAAGGGTTCAATGCTAAGTTGGGTGATTTTGGTTTGGCGAGGCAAACCGAGCATGACAAGTCTCCAGATGCCACAGTGGCTGCCGGAACAATGGGTTACTTGGCACCTGAGTATCTCCTCACAGGTAAAGCTACAGAGAAAACCGATGTTTTTAGTTATGGCGCTGTGGTTCTTGAGGTGGCTAGTGGGAGAAGACCTATAGAGAAGGATGCCAGTAGGGTTGGCAAAGTTGGGGTCTGCAGCAATTTGGTAGAATGGGTTTGGAGTTTGCACCGTGAAGGGAGGTTGCTAACAGCGGCTGATGAAAGGCTAGAGGGGCAGTTTGATAGGGAGGAAATGAGGAGATTACTCTTGGTTGGGCTAGCTTGCTCCCACCCTGACCCATTGCCTAGACCCACCATGAGGAATGTGGTTCAGATGCTGGTCGGAGAGGCCAGAGTGCCTATAGTCCCAAGAATCAAGCCATCTACAGGTTTTAGTACTTCTCACTCACACCTCTTACTGAGCTTGCAAGATAGTGTATCTGACTGTGATGGTATAATCACCATATCCACCTCCTCATCAGAGAACAGCTTCAATGGTGGAGAAATAGTATGA 2097 0.4688 MSLLSFIFLPFTLFFFINDVTITATTDFDFGTLTLSSLKLLGDAHLKNGTISLTRDLAVPNSGAGRALYSIPIRFRQPGAYSPASFSTFFSFSVINLNPSSIGGGLAFLLSPDDESIGDAGGFLGLGGGGSFVAVEFDTLMDVEFKDTNGNHVGVNLNTMVSSEFCDLGEIGIDLKTGNTVNAWIEFDGFTKGLSVWVSYSNLKPKEPILTLNLDVDQFFNDFMYVGFSGSTQGSTEVHNVEWWSFSSSFDLLAVAVAPPPPVVSLMNPSANSIKPTPPSLAPSAPSNAQQKDSKSSCHNGLCKEGLGAVAGVVSAGAFVLALFAGALIWVYSKKFKHVEKLGSVGSEYIKMPKQFSCKELKAATKCFNANRIIGHGAFGTVYKGILPENGDIVAVKRCGHSGQGKNEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWSHRRKILLGVASALAYLHQECENQVIHRDIKTSNIMLDEGFNAKLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGKATEKTDVFSYGAVVLEVASGRRPIEKDASRVGKVGVCSNLVEWVWSLHREGRLLTAADERLEGQFDREEMRRLLLVGLACSHPDPLPRPTMRNVVQMLVGEARVPIVPRIKPSTGFSTSHSHLLLSLQDSVSDCDGIITISTSSSENSFNGGEIV 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1304 698 ProSiteProfiles Protein kinase domain profile. 368 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1304 698 SMART serkin_6 368 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1304 698 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 258 IPR013320 -
Lal18g1304 698 Gene3D Phosphorylase Kinase; domain 1 332 443 - -
Lal18g1304 698 Gene3D - 24 256 - -
Lal18g1304 698 Pfam Protein kinase domain 369 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1304 698 ProSitePatterns Protein kinases ATP-binding region signature. 374 397 IPR017441 GO:0005524
Lal18g1304 698 CDD STKc_IRAK 374 641 - -
Lal18g1304 698 PANTHER - 18 691 - -
Lal18g1304 698 ProSitePatterns Legume lectins beta-chain signature. 133 139 IPR019825 -
Lal18g1304 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Lal18g1304 698 CDD lectin_legume_LecRK_Arcelin_ConA 42 250 IPR001220 GO:0030246
Lal18g1304 698 SUPERFAMILY Protein kinase-like (PK-like) 349 664 IPR011009 -
Lal18g1304 698 Pfam Legume lectin domain 27 249 IPR001220 GO:0030246
Lal18g1304 698 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 18 691 - -
Lal18g1304 698 Gene3D Transferase(Phosphotransferase) domain 1 444 647 - -
Lal18g1304 698 MobiDBLite consensus disorder prediction 275 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1304 Lal-Chr18 15569780 15571876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1304 1 680 Receptor kinase-like Gene Family AT3G53380 70.072 0.0 921
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lal18g1304 Pkinase 2.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1304 - - lang:109356779 1103.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1304 18 15569780 15571876 Lal22g0297 22 1885891 1888005 LSH
Lal18g1304 18 15569780 15571876 Lal6g0323 6 2080229 2082313 LSH
Lal3g0508 3 3642325 3644379 Lal18g1304 18 15569780 15571876 PCT
Lal18g1304 18 15569780 15571876 Lal3g0508 3 3642325 3644379 PCT