Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1288 ATGGCGAAAGCTTCAGTGCCAGTGAAATCAGTTGTATACGCACTTTCACCATTCCAACAGAAGATAATGAGTGGGTTGTGGAAGGATTTGCCAAATAAGATTCATCATAAGATCTCTGATAATTGGATCAGCGCCACCCTTTTACTCACTCCACTCGTCGGTGTCTACACGTATGTTCAGACCTACCAGGAAAAGGAGAAGCTGTCACACAGATACTAA 219 0.4338 MAKASVPVKSVVYALSPFQQKIMSGLWKDLPNKIHHKISDNWISATLLLTPLVGVYTYVQTYQEKEKLSHRY 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1288 72 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT 8 1 72 IPR020101 GO:0005750|GO:0070469
Lal18g1288 72 PANTHER CYTOCHROME B-C1 COMPLEX, SUBUNIT 8 1 72 - -
Lal18g1288 72 SUPERFAMILY Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11 64 IPR036642 GO:0005750|GO:0006122
Lal18g1288 72 Pfam Cytochrome b-c1 complex subunit 8 1 72 IPR020101 GO:0005750|GO:0070469
Lal18g1288 72 Gene3D - 5 72 IPR036642 GO:0005750|GO:0006122
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1288 Lal-Chr18 15455905 15457952 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1288 1 72 Chloroplast and Mitochondria Gene Families AT3G10860 70.833 5.83e-36 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1288 - - gmx:100500582 128.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1288 18 15455905 15457952 Lal18g1288 18 15455905 15457952 ECH