Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1285 ATGTACCTTCCAGTAAAAGCACACACCATGAAGTTATATTGCCCTGAAATGCAACATTTCCTTTTTATCATTGTTATTCTTTTTCCTCTGGTTATAGCTGATCATGGTTCTGATAAGCAAGCCCTTCTTGATTTTGCTGCTGCTGTTCCCCATCGTCGGAATCTTAAGTGGAATCCAGCTACCTCAATCTGTACTTCTTGGGAAGGCATCACTTGCGATCCAGATGGAACTCGTGTTGTTTCTGTCCGGCTCCCTGGAATTGGACTAGTGGGCACCATCCCAGCCAATACACTCGGAAAACTTAATGCACTAAAAAACATTAGTCTTCGCTCCAACCTACTCAGTGGAACTCTTCCTACTGATATTACTTCTCTTCCTTCTCTCCAATATCTCTATCTTCAGCATAATAACCTTTCTGGTGATATACCATCCTCATTGTCAGCCCAACTCATTGTACTCGATTTGTCGTACAATTCCTTCACTGGTAGCATTCCAAAGACAATAAAGAATTTGACACAACTAACTAGACTGAACCTCCAGAACAACTCCCTATCTGGACCGATACCTAATCTAAATGTCACTAAACTCAGACACTTGAATTTAAGCAACAACCATTTGAATGGCTCTATCCCTGAAACTCTTCAGATTTTTCCAAATTCTTCATTTGAAGGGAACTCTCTCTTATGTGGGTTGCCATTAAAGTCATGCTCTCTAGTCCCCCATACACCTTCTCCTCCCACATTGACTCCAACCGCACCATCACCACCTGCAAAACAAAGATCCAAAAATAAACTGAGTAAGGCTGCTATCATTGCAGTTGCAGTTGGAGGAGCTGCACTGTTGTTTTTGGTGACTCTTGTTAGTGTTCTTTTCTGTTTAAAGAAAAAAGCTAATCGAAGCTCCAGCGCAGATAAAGGGAAGGGTCCAAGTGGAGGTAGGAGTGTGAAGCCAAAAGAAAAGTTCGGAAGTGGGGTGCAAGACACTGAGAAAAACAAATTGGTTTTCTTTGAGGGCTGTTCCTATAATTTTGATCTTGAGGATTTGCTTAGGGCTTCTGCTGAAGTTCTTGGAAAGGGTAGTTATGGTACTGCGTACAAGGCCATATTAGAGGAGTCAACAACAGTTGTAGTGAAAAGGTTGAAAGAAGTTGTGGTAAGCAAAAGGGACTTTGAACAACAGATGGAGATTATAGGAAGGGTTGGACAGCATCCAAACGTTCTGCCACTTCGTGCTTATTATTATTCAAAGGATGAAAAGCTTTTGGTGTCTGATTATATCCCAAATGGCAATCTATCAACACTCTTGCATGGTAGTCGGGCTGATGAAAGAACTCTACTAGATTGGGAGTCTAGAGTGAAAATCTCTATTGGAATTGCCAGAGGAGTTGCTCACTTACATTCTGCCGGTGGTCCAAAATTCACACACGGAAATATCAAAGCCTCAAATGTCCTCCTCAACCAAGATAATGATGGCTGCATTTCCGATTTTGGTCTGACACCACTTATGAATGTTCATGCAACCCCTTCTAGAGCTGCAGGTTATCGTGCTCCGGAAGTGATTGAAACCCGTAAGCACACTCATAAATCAGATGTCTACAGTTTTGGTGTCCTTATTCTGGAAATGCTTACTGGGAAGGCGCCACAGCAATCTCCGAGACGTGATGACATGGTTGATCTCCCTAGGTGGGTCCAGTCTGTTGTTAGGGAAGAGTGGACAGCCGAGGTTTTTGATGTCGAGCTAATGAGATACCAAAATATTGAAGAAGAAATGGTGCAAATGTTGCAAATTGGCATGGCATGTGTGGCAAAGGTTCCTGATATGAGGCCTAGCATGGAGGAAATAGTGAGAATGGTCGAAGATATCCGACGATCTGACTCAGAGAATCGGCCATCTTCTGAAGAGAATAAATCTAAGGAATTAAATGTTCAATCTCCATAA 1938 0.4236 MYLPVKAHTMKLYCPEMQHFLFIIVILFPLVIADHGSDKQALLDFAAAVPHRRNLKWNPATSICTSWEGITCDPDGTRVVSVRLPGIGLVGTIPANTLGKLNALKNISLRSNLLSGTLPTDITSLPSLQYLYLQHNNLSGDIPSSLSAQLIVLDLSYNSFTGSIPKTIKNLTQLTRLNLQNNSLSGPIPNLNVTKLRHLNLSNNHLNGSIPETLQIFPNSSFEGNSLLCGLPLKSCSLVPHTPSPPTLTPTAPSPPAKQRSKNKLSKAAIIAVAVGGAALLFLVTLVSVLFCLKKKANRSSSADKGKGPSGGRSVKPKEKFGSGVQDTEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESTTVVVKRLKEVVVSKRDFEQQMEIIGRVGQHPNVLPLRAYYYSKDEKLLVSDYIPNGNLSTLLHGSRADERTLLDWESRVKISIGIARGVAHLHSAGGPKFTHGNIKASNVLLNQDNDGCISDFGLTPLMNVHATPSRAAGYRAPEVIETRKHTHKSDVYSFGVLILEMLTGKAPQQSPRRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIGMACVAKVPDMRPSMEEIVRMVEDIRRSDSENRPSSEENKSKELNVQSP 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1285 645 ProSiteProfiles Protein kinase domain profile. 350 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1285 645 Gene3D Ribonuclease Inhibitor 35 190 IPR032675 -
Lal18g1285 645 ProSitePatterns Protein kinases ATP-binding region signature. 356 378 IPR017441 GO:0005524
Lal18g1285 645 Pfam Protein kinase domain 353 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1285 645 Gene3D Phosphorylase Kinase; domain 1 318 425 - -
Lal18g1285 645 Pfam Leucine rich repeat 92 138 IPR001611 GO:0005515
Lal18g1285 645 Gene3D Transferase(Phosphotransferase) domain 1 426 644 - -
Lal18g1285 645 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Lal18g1285 645 SMART LRR_typ_2 125 149 IPR003591 -
Lal18g1285 645 SMART LRR_typ_2 193 224 IPR003591 -
Lal18g1285 645 MobiDBLite consensus disorder prediction 300 323 - -
Lal18g1285 645 CDD STKc_IRAK 356 621 - -
Lal18g1285 645 MobiDBLite consensus disorder prediction 620 636 - -
Lal18g1285 645 Gene3D Ribonuclease Inhibitor 191 237 IPR032675 -
Lal18g1285 645 ProSiteProfiles Leucine-rich repeat profile. 127 149 IPR001611 GO:0005515
Lal18g1285 645 SUPERFAMILY Protein kinase-like (PK-like) 354 627 IPR011009 -
Lal18g1285 645 Pfam Leucine Rich Repeat 150 171 IPR001611 GO:0005515
Lal18g1285 645 Pfam Leucine Rich Repeat 195 215 IPR001611 GO:0005515
Lal18g1285 645 MobiDBLite consensus disorder prediction 620 645 - -
Lal18g1285 645 PANTHER LRR RECEPTOR-LIKE KINASE 7 645 - -
Lal18g1285 645 PANTHER OS05G0588300 PROTEIN 7 645 - -
Lal18g1285 645 SUPERFAMILY L domain-like 49 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1285 Lal-Chr18 15440512 15445296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1285 20 643 Receptor kinase-like Gene Family AT5G58300 68.463 0.0 854
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal18g1285 Pkinase 3.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1285 - - gmx:100818344 999.579
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1285 18 15440512 15445296 Lal18g1285 18 15440512 15445296 ECH
Lal5g1256 5 15317657 15320229 Lal18g1285 18 15440512 15445296 PCT
Lal3g0466 3 3210225 3214467 Lal18g1285 18 15440512 15445296 PCT
Lal18g1285 18 15440512 15445296 Lal5g1256 5 15317657 15320229 PCT
Lal18g1285 18 15440512 15445296 Lal3g0466 3 3210225 3214467 PCT