Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1279 ATGCAAAATCCGTTTTCAAACCCTAATTCCAATCCCAATCCTCACAATGCTAATGCTGCTTCACAACTACCGCCGCCTCCGCCGTCCACGGCAGCGGCAAACTCATCGTCGTCTTCATTTTTCATCCGATCCGGCGGAAATGGTGGATCGCTCCACCGGAGATCTCATTCGGAGGTCAGTTTCCGGTTACCGGACGACATGATGGACCTTTCGCCGTCCGATCCGTTCAACGGCGGGTCGTCGACCGCGACATTCGATGAGATCGGATCGGAGGATGATTTGTTTTCCACGTACATTGACGTGGACAAGCTCGGAGGTTCGATCGGGTCGGGTGGGAATGGTGAACCGTCGGAGAAGAACCCTAACGTGAGGCCGAGGCATAGGCACAGTAGTTCGGTGGATGGTTCTACATCGTCGTTTGATGAGATTATGGATGCGAAGAAAGCTATGCCTCCGGATAAGTTAGCAGAGCTTTGGACAATTGATCCCAAACGCGCCAAGAGAATACTTGCAAATCGACAATCTGCTGCTCGTTCAAAAGAGAGAAAGGCTCGCTATATACAGGAACTGGAGCGCAAAGTTCAGACCCTTCAGACTGAAGCCACAACACTTTCTGCTCAACTGACACTGTACCAGAGGGACACAACAGGTTTGAGTACTGAAAATACAGAGCTTAAGGTCCGTCTGCAAGCCATGGAGCAACAAGCACATCTTCGTGATGCTCTTAATGAAGCACTGAAGAAGGAAGTGGAGAGGCTTAAAGTAGCCACTGGGGAGATGATGAGCCCTACCGACTCTTTCAATCTTGGAATGCACCAGATGCCATTTACAGGATCAACTTTCTTTCCAACCCCACCACAATCAGGTCCTTCTGGTCAGCAAAACATGCAGTTCCCACCATTTGGTCATGCCCCATCTGGTGTGCCAACTCATCAACTGCAACAAATAAATTCTCATTCGCTCTCAGAAATATTGCAAAATGGCCAGCTTGGTCGTTTTCAAGGACTCGACATTAGTAGCAACGGATCAACTCTAGTGAAGTCTGAAGGCCCCTCACTCTCTGCAAGTGAGAGTAGCACTACATTTTGA 1089 0.4931 MQNPFSNPNSNPNPHNANAASQLPPPPPSTAAANSSSSSFFIRSGGNGGSLHRRSHSEVSFRLPDDMMDLSPSDPFNGGSSTATFDEIGSEDDLFSTYIDVDKLGGSIGSGGNGEPSEKNPNVRPRHRHSSSVDGSTSSFDEIMDAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKVRLQAMEQQAHLRDALNEALKKEVERLKVATGEMMSPTDSFNLGMHQMPFTGSTFFPTPPQSGPSGQQNMQFPPFGHAPSGVPTHQLQQINSHSLSEILQNGQLGRFQGLDISSNGSTLVKSEGPSLSASESSTTF 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1279 362 MobiDBLite consensus disorder prediction 280 310 - -
Lal18g1279 362 MobiDBLite consensus disorder prediction 280 300 - -
Lal18g1279 362 CDD bZIP_plant_RF2 165 214 IPR044759 GO:0003700|GO:0006355
Lal18g1279 362 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 6 359 - -
Lal18g1279 362 SUPERFAMILY Leucine zipper domain 164 215 IPR046347 GO:0003700|GO:0006355
Lal18g1279 362 MobiDBLite consensus disorder prediction 106 138 - -
Lal18g1279 362 Pfam bZIP transcription factor 164 219 IPR004827 GO:0003700|GO:0006355
Lal18g1279 362 Coils Coil 239 259 - -
Lal18g1279 362 MobiDBLite consensus disorder prediction 343 362 - -
Lal18g1279 362 MobiDBLite consensus disorder prediction 1 87 - -
Lal18g1279 362 SMART brlzneu 160 224 IPR004827 GO:0003700|GO:0006355
Lal18g1279 362 MobiDBLite consensus disorder prediction 1 18 - -
Lal18g1279 362 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 162 225 IPR004827 GO:0003700|GO:0006355
Lal18g1279 362 MobiDBLite consensus disorder prediction 32 54 - -
Lal18g1279 362 Coils Coil 180 207 - -
Lal18g1279 362 Gene3D - 163 215 - -
Lal18g1279 362 PANTHER ATBZIP TRANSCRIPTION FACTOR 6 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1279 Lal-Chr18 15387894 15391254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1279 10 362 bZIP Transcription Factor Family AT2G40620 51.358 7.06e-105 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal18g1279 bZIP_1 5.1e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1279 - - vra:106763153 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1279 18 15387894 15391254 Lal18g1279 18 15387894 15391254 ECH
Lal18g1279 18 15387894 15391254 Lal22g0319 22 2024852 2028269 LSH
Lal5g1265 5 15379550 15383587 Lal18g1279 18 15387894 15391254 PCT
Lal3g0441 3 3058907 3062274 Lal18g1279 18 15387894 15391254 PCT
Lal18g1279 18 15387894 15391254 Lal5g1265 5 15379550 15383587 PCT
Lal18g1279 18 15387894 15391254 Lal3g0441 3 3058907 3062274 PCT