Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1276 ATGATGGGCAACAAGTTCAAATTGTCAGATATGATTCCAAATGCTTGGTTTTACAAGCTCAAAGATATGAGCAAATCGAGGAAGAGAAACGGTCCTCGTGTTGTGAAGAACAAAGCAACTCGATCCTCGACGGATCATCGGCTGCTACGCGACTCAACCTCACCAAAATATTCACATTATGTCTGCACTGAACCAAGCAAAACAGGGAAGTTATATAACACACCTATTCTCACCAATGACTTGAACATGCCATTCATTGATTCACCGCGACGGTCTTCTAAGAGAAAATCTAGGAGAAAAACCATTTACAAGCCTTCTCCCAATGTTGTATCTTATTCTTTCAAAGCTAGTTCTAGCTGTGATTCTACAAATCAATGGACTAAGACATGTCAAGTTCAGTCTCCAGTCTATGATGACTCTTCCTTTGAAAGTTCTTCTGAGTCTGAGTGTGATACCTTTTCTGTTCCTAACTTGCTTAATGGAATAGACTCTAATCGCAGCTGCAGAGTTAGCTCTTCCACTAATGACATCATCATTGACATGACAAATGAATGCTTCACTGGAAATCCTGAAAATTTAGATGGGTTTGATACTATTTCACAGTTAGGCCTTGCTCCAATACATACAAAACCAGTGATGTTTGATGAGAAGGGAACTAAGGCTACCGAGTTAAGAAGTTCGAGTTCAAGCGAATTGGATGTACTGCAACTTCATCACACTCTCCTTGTCAAGTTTAGCAAAGAGAAAAGCAGTAAAGCTCATAGAAGGAGAAAGGGAAGTCAAATAGCTCGAAAATCATCTGCTAATTCTACGGGCGTAAAACTTAGAGTCAATTCTCCAAAATTAGCAAGCAAGAAAATTCAAGCCAATGCGAGAAGCGTGCCATCCAATAGTTCTAGTAAAGCGTCGAGGAATACAAACTTTCCAGAAGGATATGCTGTTATTAAGTCTTCATTTGATCCACAGAGAGATTTCAAGGAGTCAATGGTGGAGATGATCGTGGAGAACAATATTCGGGCATCGAAGGCTTTGGAGGACTTACTTGCCTGCTATCTTTCCCTTAATTCAAGTGAATACCATGATCTCATTGTTAAAGCATTTGAGCAAATTTGGTTTGACATGGCTCAACTGAAAATGTAA 1140 0.3974 MMGNKFKLSDMIPNAWFYKLKDMSKSRKRNGPRVVKNKATRSSTDHRLLRDSTSPKYSHYVCTEPSKTGKLYNTPILTNDLNMPFIDSPRRSSKRKSRRKTIYKPSPNVVSYSFKASSSCDSTNQWTKTCQVQSPVYDDSSFESSSESECDTFSVPNLLNGIDSNRSCRVSSSTNDIIIDMTNECFTGNPENLDGFDTISQLGLAPIHTKPVMFDEKGTKATELRSSSSSELDVLQLHHTLLVKFSKEKSSKAHRRRKGSQIARKSSANSTGVKLRVNSPKLASKKIQANARSVPSNSSSKASRNTNFPEGYAVIKSSFDPQRDFKESMVEMIVENNIRASKALEDLLACYLSLNSSEYHDLIVKAFEQIWFDMAQLKM 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1276 379 MobiDBLite consensus disorder prediction 263 305 - -
Lal18g1276 379 MobiDBLite consensus disorder prediction 27 51 - -
Lal18g1276 379 ProSiteProfiles OVATE domain profile. 314 373 IPR006458 -
Lal18g1276 379 MobiDBLite consensus disorder prediction 247 305 - -
Lal18g1276 379 Pfam DNA-binding domain 2 42 IPR025830 GO:0003677
Lal18g1276 379 PANTHER TRANSCRIPTION REPRESSOR OFP1-LIKE 3 377 - -
Lal18g1276 379 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 377 IPR038933 GO:0045892
Lal18g1276 379 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 313 374 IPR006458 -
Lal18g1276 379 Pfam Transcriptional repressor, ovate 318 374 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1276 Lal-Chr18 15366484 15367623 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lal18g1276 Ovate 2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1276 - - gmx:100780926 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1276 18 15366484 15367623 Lal18g1276 18 15366484 15367623 ECH
Lal18g1276 18 15366484 15367623 Lal22g0322 22 2040019 2041143 LSH
Lal3g0436 3 3029722 3030762 Lal18g1276 18 15366484 15367623 PCT
Lal18g1276 18 15366484 15367623 Lal3g0436 3 3029722 3030762 PCT