Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1274 AGACACAACTGGGAATGCCGAAAGATGTGCTCTGTCTTTGAGATCCATAAGGTTATATTCTTGCAGTTACTGCCCCTCTTAATGCTTGACAAGAGTAGACCACAATTCTCTATATCATTTGTACATTATTACTTGATGCACAATTGGCACACAAGTTATAATAGAGTTCCTGTTATGTTAGTGCATGATCTGTGCGAAGACGGCCAAATAACATTTGGATATTTTATTGTTCCCCCAAAGGTCTCTCATATGGAGAATAAGTCAAATGTCTTAATGGAAAGATATGAGTTAGGGAGATTACTAGGCCAAGGCACCTTTGCAAAGGTTTACTATGGTCGAAGTGCGATAACTAACCAGAGTGTGGCTATTAAAGTGGTTGACAAGGATAAGGTTATGAGAACTGGGCAAGCAGATCGTATAATACAGGAAATATCTATTATGAGACTCCTTAAACATCCAAATATTATACAGCTTTTTGAGGTCATGGCCACAAAGAGTAAGATTTACTTTGTTATTGAATATGCTAAAGGTGGCGAGCTCTTCAACAAGGTGGCAAAATCAAAGCTCAAAGAAGATGTTGCATTCAAATATTTTAGGCAGCTAATTAACGCTGTGGATTTTTGTCACAGCAGAGGCGTATACCATAGAGATATAAAGCTAGAGAACCTTTTGTTGGATGAAAATGAGAACCTAAAGGTCTCAGATTTTGGGTTAAGTGCGTTGAACGAATCCAAATGGCAGGATGGCTTACTACATACAGCTTGTGGAACACCTGCCTATGTTGCTCCTGAAGTCATCAAAAGGAAGGGCTATGATGGTGCCAGAGCTGATATTTGGTCTTGTGGAGTAGTCCTGTTTGTCTTAATGGCTGGTTATCTTCCTTTTAATGACCCTAATGTTATTGAGTTGTATAGGAAGATAGGAAAAGCAGAGTTTATATGTCCTGATTGGTTCCCACGAGAAGTCCGGAGGCTGTTGCGCAAGATGTTGGATCCAAACCCTGACACTAGGATTTCCATAACTAAGATTAAGGAGAGTTCTTGGTATAGGAAAGGGCTAAGTGCTACCTCTAGACAGACAAGACGTTTAGGGAAAAACAAGACCGCCTCTGCTGCTGTTACAAATCGTTCTTGTCAATGTGATGAAAGTGATAGTCTAGCAACCGAAGCAAGGCAAGAGTCAGTTGTTCCCACAAGTATAAATGCCTTTGATATCATTTCTCTTTCACCTGGTTTTAATCTCTGTAGAATCTTTGAAGACAAATTTCAGAATAGGGAAACAAGGTTTAGTTCAAGACAACCTGCATCAGCCATCGTCTCCAAGCTGGAAGAAATTGCTAAGCGGCTGAAGCTGAAAATAAATAAAAGAGCTGCAGGTTTGTTGAAATTAGAGGGCCTCAATGAAGGTAAGAAGGGGATTTTATCCATTGATGCAGAAATCTTTGAGGTTACGCCATCTTTCCATTTGGTGGAGGTGCAAAAATCCAATGGTGATACATTGGAGTATCAGAAAATATTGAATGAGGATATAAGGCCTGCTCTCAAGGACATTGTTTGGGTTTGGCAAAGTGACCAACAAGAGCAATCACAACAGTCAGAGCAACAGCAACAGAAACATGACCAGCAGCAACAACAGCCACAGTCATAA 1647 0.4019 RHNWECRKMCSVFEIHKVIFLQLLPLLMLDKSRPQFSISFVHYYLMHNWHTSYNRVPVMLVHDLCEDGQITFGYFIVPPKVSHMENKSNVLMERYELGRLLGQGTFAKVYYGRSAITNQSVAIKVVDKDKVMRTGQADRIIQEISIMRLLKHPNIIQLFEVMATKSKIYFVIEYAKGGELFNKVAKSKLKEDVAFKYFRQLINAVDFCHSRGVYHRDIKLENLLLDENENLKVSDFGLSALNESKWQDGLLHTACGTPAYVAPEVIKRKGYDGARADIWSCGVVLFVLMAGYLPFNDPNVIELYRKIGKAEFICPDWFPREVRRLLRKMLDPNPDTRISITKIKESSWYRKGLSATSRQTRRLGKNKTASAAVTNRSCQCDESDSLATEARQESVVPTSINAFDIISLSPGFNLCRIFEDKFQNRETRFSSRQPASAIVSKLEEIAKRLKLKINKRAAGLLKLEGLNEGKKGILSIDAEIFEVTPSFHLVEVQKSNGDTLEYQKILNEDIRPALKDIVWVWQSDQQEQSQQSEQQQQKHDQQQQQPQS 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1274 548 SUPERFAMILY Protein kinase-like (PK-like) 91 405 IPR011009 -
Lal18g1274 548 SMART serkin_6 95 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1274 548 Gene3D Transferase(Phosphotransferase) domain 1 182 398 - -
Lal18g1274 548 Gene3D Kinase associated domain 1, KA1 399 520 - -
Lal18g1274 548 Pfam Protein kinase domain 95 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1274 548 MobiDBLite consensus disorder prediction 528 548 - -
Lal18g1274 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Lal18g1274 548 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 85 538 - -
Lal18g1274 548 Coils Coil 525 545 - -
Lal18g1274 548 Pfam NAF domain 397 455 IPR004041 GO:0007165
Lal18g1274 548 Gene3D Phosphorylase Kinase; domain 1 88 181 - -
Lal18g1274 548 PANTHER - 85 538 - -
Lal18g1274 548 CDD CIPK_C 401 515 - -
Lal18g1274 548 ProSiteProfiles Protein kinase domain profile. 95 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1274 548 ProSitePatterns Protein kinases ATP-binding region signature. 101 124 IPR017441 GO:0005524
Lal18g1274 548 ProSiteProfiles NAF domain profile. 395 419 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1274 Lal-Chr18 15353647 15355364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1274 84 527 CBL-interacting serine-threonine protein kinases AT5G58380 65.132 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lal18g1274 Pkinase 8.7e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1274 - K07198 gmx:100779316 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1274 18 15353647 15355364 Lal18g1274 18 15353647 15355364 ECH
Lal18g1274 18 15353647 15355364 Lal4g1598 4 20158107 20160049 ECH
Lal14g0790 14 9840179 9841848 Lal18g1274 18 15353647 15355364 ECH
Lal9g1714 9 19385994 19388894 Lal18g1274 18 15353647 15355364 ECH
Lal5g1279 5 15489781 15491109 Lal18g1274 18 15353647 15355364 PCT
Lal18g1274 18 15353647 15355364 Lal5g1279 5 15489781 15491109 PCT