Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1272 ATGGCTGCTTCTCATTTCCAATATTTCCTTTGCCTTGTTTTGGTCACCTTGACAACATTAATTGTAATCCCTACTACACATGCCAAGTTAAGTCCTAATTACTATAACAAAGTTTGCCCTCAGGCATTAACAATCATAAGGTCTGCTGTTAAGAAAGCAATTACTCGTGAGCGCCGTATTGGAGCATCTTTGTTGCGTCTTCACTTCCATGACTGCTTTGTTAATGGTTGTGATGCATCAGTTCTTCTAGATGACACTCCTTTCTTCACGGGAGAGAAGACTGCATTCCCAAATAATAATTCATTGAGAGGGTTTGATGTGGTTGATGAGATTAAAGCAGCTGTTGACAAAGCTTGCAAACGCTATGTGGTATCATGTGCTGATATCTTAGCTATAGCAGCTCGTGATTCTGTAGCCATATTGGGAGGACAGAAATACTGGTACCAAGTGTTATTAGGAAGAAGAGATGCAAGAAATGCATCCTGGGATGCTGCAAATAACAATCTTCCTCCTCCATTTTTCAACTTCTCACAGCTTCTTGGTCTTTTCAATGCTCATGGTCTGAACCTTAAAGACCTTGTAGTCCTTTCTGGAGCCCACACCATTGGTTCTACCCAATGCGGTGTTTTCAGAGAAAGGATCTACAATGACACCAATATTGACCCAACATTTGCAGCCACTTTGCGTAATATATGCCCTAAAACTGGGGGTGACCCCATTTTAGCACCATTGGATTCAACTCCTAATAGATTTGACAATGCATACTATACTTCTTTGTTGTTTAAAGAGGGTCTTCTTCATTCTGATCAAGAGCTCTTCAAGGGTAATGGTAGTGACAGTGACAAATTGGTGCAACTATACAGAAAAAACTCTTATGCTTTTGCTGCTGACTTTGGACCTTCAATGATCAAGATGGGTAACATCAAGCCTCTTACTGGAAATAATGGAGAGATCAGATGTAATTGCAGGAAAATCAACAATTTATAA 987 0.4002 MAASHFQYFLCLVLVTLTTLIVIPTTHAKLSPNYYNKVCPQALTIIRSAVKKAITRERRIGASLLRLHFHDCFVNGCDASVLLDDTPFFTGEKTAFPNNNSLRGFDVVDEIKAAVDKACKRYVVSCADILAIAARDSVAILGGQKYWYQVLLGRRDARNASWDAANNNLPPPFFNFSQLLGLFNAHGLNLKDLVVLSGAHTIGSTQCGVFRERIYNDTNIDPTFAATLRNICPKTGGDPILAPLDSTPNRFDNAYYTSLLFKEGLLHSDQELFKGNGSDSDKLVQLYRKNSYAFAADFGPSMIKMGNIKPLTGNNGEIRCNCRKINNL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1272 328 Gene3D Peroxidase, domain 2 170 305 - -
Lal18g1272 328 ProSiteProfiles Plant heme peroxidase family profile. 29 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal18g1272 328 PANTHER CATIONIC PEROXIDASE 10 326 - -
Lal18g1272 328 PANTHER PEROXIDASE 72-RELATED 10 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal18g1272 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Lal18g1272 328 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal18g1272 328 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal18g1272 328 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal18g1272 328 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal18g1272 328 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal18g1272 328 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal18g1272 328 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal18g1272 328 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal18g1272 328 Gene3D - 33 323 - -
Lal18g1272 328 CDD secretory_peroxidase 29 325 IPR033905 GO:0004601|GO:0042744
Lal18g1272 328 Pfam Peroxidase 47 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal18g1272 328 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal18g1272 328 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal18g1272 328 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal18g1272 328 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal18g1272 328 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal18g1272 328 SUPERFAMILY Heme-dependent peroxidases 30 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lal18g1272 328 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1272 Lal-Chr18 15336881 15339298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1272 27 326 Peroxidase AT5G05340 55.776 4.26e-114 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1272 K00430 - gmx:100816580 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1272 18 15336881 15339298 Lal18g1272 18 15336881 15339298 ECH
Lal18g1272 18 15336881 15339298 Lal22g0328 22 2082437 2085319 LSH
Lal18g1272 18 15336881 15339298 Lal6g0358 6 2276590 2280025 LSH