Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1269 ATGGAATCTCACATTGGAAAGCATGATTATGCTAAATTGCTTCAAGCTCAATCCCACATATGGAATCACATATTCAGCTTTATAAACTCCATGTCCCTTAAATGTGCTGTTGACTTAGGCATACCAGATGTCATACATAACTATGGCCAACCCATGCCATTGTCAAAACTCATCGCATCACTATCAATCCCCCCATCCAAAACCTGCTTCATCTACCGTTTGATGCGAATACTGATCCATTCCAACTTCTTTTCTGAACAAAATGTCACCGAAAAGAATGAGCTAGAAGTGGAATATGTTCTAACTGATGCATCAATACTACTGCTTAAGGACAACCCTTTTAGTATGAGACCTTTCTTGAATGCTATGCTTGACCCAATTTTGACAAAGCCATGGTATGATTTATCTGCTTGGTTAGAAAATGATGATCCTACACCATTTGAAAAGAAACATGGGATGGCGCTTTGGGATTATGCTGGCCATCATCCAAATCTTAACCACTTTTTCAATGATGCCATGGAATGTGACGCTCCATTTGTTAGCAGCGTGTTAATTGAGAAGTACAAAGAGACATTCAAGGGATTTGAATCATTGGTTGATGTTGGGGGAGGCACAGGAGATGTAGCTAAAGCAATTGCTAGTTCATTCCCACAATTGGAGTGCGTTGTATTTGATCTTCCACATGTTGTTACTGGCTCGCAAGGAAGTGATAACCTTAAATATGTTGGAGGCAACATGTTTGAGGCAATTCCTCCAACTGATGTCATTTTGTTGAAGTGGATACTGCATGACTGGAATGATGAGGAATGTGTGAAGATATTGAAGAAATGTAGGGAGGCAATCACAAGCAAAGGCAAATATGTGGGTAAGGTGATTATCATAGACATAGTGATATCTGAGAATGAGAAAAGAGGTGACAAATCACTTGAAACACAACTTTTCTTTGATATGTTGATGATGGTGTTGGTTAGTGGAAGAGAGAGAAATGAGAAAGAATGGGCAAAACTGATCTTCTCTTCTGGTTTCAGTCACTACAAGATAACTCCAGTTCTGGGTTTAAGGTCTATTATTGAGTTATATCCATAG 1086 0.3913 MESHIGKHDYAKLLQAQSHIWNHIFSFINSMSLKCAVDLGIPDVIHNYGQPMPLSKLIASLSIPPSKTCFIYRLMRILIHSNFFSEQNVTEKNELEVEYVLTDASILLLKDNPFSMRPFLNAMLDPILTKPWYDLSAWLENDDPTPFEKKHGMALWDYAGHHPNLNHFFNDAMECDAPFVSSVLIEKYKETFKGFESLVDVGGGTGDVAKAIASSFPQLECVVFDLPHVVTGSQGSDNLKYVGGNMFEAIPPTDVILLKWILHDWNDEECVKILKKCREAITSKGKYVGKVIIIDIVISENEKRGDKSLETQLFFDMLMMVLVSGRERNEKEWAKLIFSSGFSHYKITPVLGLRSIIELYP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1269 361 Pfam O-methyltransferase domain 132 343 IPR001077 GO:0008171
Lal18g1269 361 SUPERFAMILY "Winged helix" DNA-binding domain 12 113 IPR036390 -
Lal18g1269 361 Gene3D - 2 108 IPR036388 -
Lal18g1269 361 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Lal18g1269 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 359 IPR029063 -
Lal18g1269 361 PIRSF O-mtase 1 361 IPR016461 GO:0008168
Lal18g1269 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 361 IPR016461 GO:0008168
Lal18g1269 361 PANTHER ORCINOL O-METHYLTRANSFERASE 7 361 - -
Lal18g1269 361 PANTHER O-METHYLTRANSFERASE 7 361 IPR016461 GO:0008168
Lal18g1269 361 Gene3D Vaccinia Virus protein VP39 109 361 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1269 Lal-Chr18 15321533 15323243 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1269 31 347 Monolignol Biosynthesis Gene Families AT5G54160 33.742 6.29e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1269 - K16040 gmx:100807238 545.428