Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1264 ATGGCCTCTTCTTCTGGTAGTATAAACACTACTCATGCAAACTCTTATAAAAACTTCACCTTCTCAACACACCCTTTTATGACCACATCATTATCTGAACTTTTAGCTTCTCCCATAGATGATAATAATAATAATAATAATAAGCATCGTGGTAATGGTTTATCAGATCGTATAGCTGAGAGAACAGGTTGTGGTGTACCAAAATTCAAGTCTATACAACCTCCTTCACTTCCTCTATCTCCTCCTCTCTTTTCTCCTTCTTCTTACTTTGCTATTCCTCCTGGTTTAAGCCCTGCTGAACTTCTTGATTCTCCTGTTCTCTTAAACTCTTCTCATACTTTGCCATCTCCAACAACTGGAGCATTTGGTGCTAAGAGTTACAATGATTGGAAGAACAATTCTGGGGGTAACCAACAAATTATCAAAGAACAAGACAAAAAATTCTCAAACTTCACTTTTCAAACCCAAACAGGACCTTCTCCTGCATCAACAGCAACTTTTCAATCTTTAAATGCCATAGTTCAATCTCAAGAGCCATGGAGTTATCAGGAAGCTAGAAAACAGGATAGTTTTTCTTCAGGGAGAAGTATGATGAAAACTGAAAACTCTTCTTCCATGCAGAGTTTTCAGCCAGATATTTCAAGTCTCCAAACTAATAACAACAAATACCAACAACAACCACAAGTTCAGATCTTAAGTAGAAGGTCAGATGATGAATATAATTGGAGGAAATATGGACAAAAACAAGTAAAAGGAAGTGAAAACCCAAGGAGTTATTACAAATGCACATACCCTAATTGCTCTACAAAAAAGAAGGTTGAAAGATCTCTGGATGGACAAATTACTGAGATAGTTTACAAGGGTAGTCATAATCATCCTAAGCCTCAGAACACTAGGAGAAATTCATCATCTTCCTCTTCTGTGTCAATGATTCATTCAAATCCCATCAGCTCAGAAATCCAAGATCAGTCATATGCTACCAATGGCAGTGGCCAAATGGATTCTGTTGCTACCCCAGAAAATTCATCAATATCAATAGGAGATTGTGATTTTGAGCAGAATTCTCAAAAGTGTAGGTCAGGAGGGGATGAGTATGATGAAGATGAGCCTGATTCAAAAAGATGGAAAAATGAAGGAGAAAATGAGGGTATATCAGCTCCTGGAAGTAGAACTGTTAAGGAACCAAGGGTTGTAGTTCAAACAACAAGTGACATTGATATCCTAGATGATGGGTACAGATGGAGGAAATATGGGCAGAAAGTAGTCAAGGGCAATCCTAATCCAAGGAGTTACTACAAATGCACACACCCAGGATGTCCAGTGAGAAAGCATGTAGAGAGAGCCTCACATGATCTTAGAGCAGTGATCACAACCTATGAGGGAAAACACAACCATGATGTCCCTGCAGCACGTGGCAGTGGCAACAATTCAGTTAATAGACCAATGCCAAACAACAACACTTCAAACCCCAACAATGCAGCCATAAGGCCCATGCCATTGAACTACTCAACTAATAACAATTCTCTTCAGAGTCTTAGGCCACAAGCATCAGATCAAGGACAATCACCCTTCACGCTAGAGATGCTGCAGAGCCCGGGAAGTTTTGGATTCTCGGGCTTTGGGAATCCAATGGGGTCTTACACGAATCAGCAGCAACAACTATCTGAGAATGCGTTTTCTTCCAGAGCAAAGGAGGAGCCTAGAGATGATACCTTCCTTGATTCTTTGCTATGCTGA 1737 0.399 MASSSGSINTTHANSYKNFTFSTHPFMTTSLSELLASPIDDNNNNNNKHRGNGLSDRIAERTGCGVPKFKSIQPPSLPLSPPLFSPSSYFAIPPGLSPAELLDSPVLLNSSHTLPSPTTGAFGAKSYNDWKNNSGGNQQIIKEQDKKFSNFTFQTQTGPSPASTATFQSLNAIVQSQEPWSYQEARKQDSFSSGRSMMKTENSSSMQSFQPDISSLQTNNNKYQQQPQVQILSRRSDDEYNWRKYGQKQVKGSENPRSYYKCTYPNCSTKKKVERSLDGQITEIVYKGSHNHPKPQNTRRNSSSSSSVSMIHSNPISSEIQDQSYATNGSGQMDSVATPENSSISIGDCDFEQNSQKCRSGGDEYDEDEPDSKRWKNEGENEGISAPGSRTVKEPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGNNSVNRPMPNNNTSNPNNAAIRPMPLNYSTNNNSLQSLRPQASDQGQSPFTLEMLQSPGSFGFSGFGNPMGSYTNQQQQLSENAFSSRAKEEPRDDTFLDSLLC 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1264 578 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 48 553 - -
Lal18g1264 578 ProSiteProfiles WRKY domain profile. 237 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal18g1264 578 MobiDBLite consensus disorder prediction 470 503 - -
Lal18g1264 578 MobiDBLite consensus disorder prediction 36 52 - -
Lal18g1264 578 SUPERFAMILY WRKY DNA-binding domain 400 468 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal18g1264 578 MobiDBLite consensus disorder prediction 325 356 - -
Lal18g1264 578 Gene3D WRKY domain 395 461 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal18g1264 578 MobiDBLite consensus disorder prediction 325 392 - -
Lal18g1264 578 Gene3D WRKY domain 222 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal18g1264 578 MobiDBLite consensus disorder prediction 357 380 - -
Lal18g1264 578 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 48 553 IPR044810 GO:0003700
Lal18g1264 578 MobiDBLite consensus disorder prediction 286 311 - -
Lal18g1264 578 MobiDBLite consensus disorder prediction 538 560 - -
Lal18g1264 578 SUPERFAMILY WRKY DNA-binding domain 234 295 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal18g1264 578 Pfam WRKY DNA -binding domain 409 465 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal18g1264 578 Pfam WRKY DNA -binding domain 237 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal18g1264 578 MobiDBLite consensus disorder prediction 179 235 - -
Lal18g1264 578 ProSiteProfiles WRKY domain profile. 403 468 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal18g1264 578 MobiDBLite consensus disorder prediction 36 59 - -
Lal18g1264 578 SMART WRKY_cls 408 467 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal18g1264 578 SMART WRKY_cls 236 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal18g1264 578 MobiDBLite consensus disorder prediction 291 311 - -
Lal18g1264 578 MobiDBLite consensus disorder prediction 464 503 - -
Lal18g1264 578 MobiDBLite consensus disorder prediction 538 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1264 Lal-Chr18 15269399 15272972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1264 66 577 WRKY Transcription Factor Family AT2G38470 47.092 2.91e-116 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal18g1264 WRKY 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1264 K13424 - gmx:100127385 853.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1264 18 15269399 15272972 Lal18g1264 18 15269399 15272972 ECH
Lal18g1264 18 15269399 15272972 Lal22g0332 22 2113617 2117179 LSH
Lal18g1264 18 15269399 15272972 Lal6g0362 6 2302659 2305975 LSH
Lal5g1010 5 12460707 12465562 Lal18g1264 18 15269399 15272972 PCT
Lal3g0662 3 5175762 5179822 Lal18g1264 18 15269399 15272972 PCT
Lal18g1264 18 15269399 15272972 Lal5g1010 5 12460707 12465562 PCT
Lal18g1264 18 15269399 15272972 Lal3g0662 3 5175762 5179822 PCT