Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1262 ATGTCATACTACATAACCCTCTCCATTTTGATGTATTTTTGCATCAATGTTGTAGTTGGTGCTACAAACAATATACCCAAGTTCTCATCCATTCTAGTTTTTGGAGATTCAACCGTAGACACAGGCAATAATAACGACCTAATAATCTCTGTGGCAAAGGCAAATCATGAACCTTATGGAAGGGATTTCCCTAGTCATGTACCCAGTGGAAGATTTTCCAATGGAAAATTGGTTCCTGATTTCATTGCCTCTTATTTGAACCTCAAAGACACTGTCCCTCCTTATAAGGACCCAAACCTATCAAATGATGAACTTCTAACTGGTGTTAACTTTGCATCTGGTGGATCAGGGTTTGATGATTATAGCTCAGTTTTTTCACATTCAATACCAGTGTCTAATCAAATTGAATACTTCAAAGATTATGTAGGAACGATCAAGGAAATTGTAGGGGAAGATAAAGCAAAACAAATACTTGGAGATGCATTGGTTATTATTAGTGCAGGTAGTAATGATGTCATTATCAATTTCTATAACCTTCTCACTAGAAAGTTGGAGTACAACATTAGTGGGTACCAAGATTTTCTGCACAATAATCTTCAAACGTACATCCAGCAACTATACGACCTTGGATGCAGAAGATTTGCTGTCGCTGGCCTTCCCCCCATTGGTTCCATACCTTTACAAATATTATTGAAATTCCTACATATGAAGGATGAGAATTCAGATTCCAAAGATTACAATCAAAAATTGGAAAAACGATTACTTGAAATGCAAGAAATGCTTCCTGGAAGCAGAGTTGTTTATGCAGAGATATATGATCCATTGGTCGACCTTATCAGTGAACCTGAAAAATATGGTTTTACTGAAACAAATATTGGGTGTTGTGGAAATGGTATTGTGTTAGAAGCAGCAGCTGTAACTTGTAATAATCTGACACCAATATGTGAAGATGCTTCAAAATATGTATTCTGGGACTGTGTCCATCCAACTCAAGCAACCTACCACTACCTTGCTAAGTACATGGAATTGAAAGTCCTCACCAAGTTTTAG 1050 0.3695 MSYYITLSILMYFCINVVVGATNNIPKFSSILVFGDSTVDTGNNNDLIISVAKANHEPYGRDFPSHVPSGRFSNGKLVPDFIASYLNLKDTVPPYKDPNLSNDELLTGVNFASGGSGFDDYSSVFSHSIPVSNQIEYFKDYVGTIKEIVGEDKAKQILGDALVIISAGSNDVIINFYNLLTRKLEYNISGYQDFLHNNLQTYIQQLYDLGCRRFAVAGLPPIGSIPLQILLKFLHMKDENSDSKDYNQKLEKRLLEMQEMLPGSRVVYAEIYDPLVDLISEPEKYGFTETNIGCCGNGIVLEAAAVTCNNLTPICEDASKYVFWDCVHPTQATYHYLAKYMELKVLTKF 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1262 349 CDD SGNH_plant_lipase_like 30 341 IPR035669 -
Lal18g1262 349 Gene3D SGNH hydrolase 20 346 IPR036514 -
Lal18g1262 349 Pfam GDSL-like Lipase/Acylhydrolase 31 340 IPR001087 GO:0016788
Lal18g1262 349 PANTHER GDSL ESTERASE/LIPASE EXL3 23 340 - -
Lal18g1262 349 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 23 340 - -
Lal18g1262 349 SUPERFAMILY SGNH hydrolase 30 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1262 Lal-Chr18 15257721 15261075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1262 1 341 Pollen Coat Proteome AT1G75910 32.571 1.06e-55 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1262 - - lang:109360817 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1262 18 15257721 15261075 Lal18g1262 18 15257721 15261075 ECH
Lal18g1262 18 15257721 15261075 Lal22g0335 22 2127846 2133213 LSH
Lal18g1262 18 15257721 15261075 Lal6g0364 6 2313720 2322315 LSH