Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1261 ATGCCCATCAGAATTCCCAATCGGGTAATCCAGAAAAAGCTATGGAGAATTGTGGGATTTATTTCAAGTTTCATTGGACTGCTTTGTTATGCTCTTAGTTCCTCTTTCAAACACTTATTTGGAGAATGGAACTTGTTGAAGATCATTGTTTACACCATAATTGAGCTTGGTTTTGTAGTGGATCTCTTCAATTTCTTCCTTGGGTGTTTAACTGTTCAACTCATGAAGTTCAATTTTATGCTCTCTATAATTGTAGTCATCTTATGCTATTCTCTCAGAGTTTTATTGGATTATCAATCACAGACTGAAACTCCAAGAATTGAAGACCATCATCATGTAACCATAGAAGTTGATACTGCAAATGAAGTTGAAAGAAGGGATGATGATGATGACAGAAATGGTGTTCAATCTGATTATAGCCTTGGACACCAAGTAACACAGTCCTTAAGAAGAAGGGTAAGTGATGATGAGTACAATTGGAGAAAATATGAAGAGAAACAAGTGGACATAAATGAAAATCAAACAAGTTACTACAAATGCACAATACCAAATTGCCCTGTGAAGAAAAAAGTTGAGAGGACTATAGATGGGAGAGTTATTGGGGTACTCTACAATGGTAACCATAATCATCACAAGCCTGGGCTTAATATAAAGAGGAATTCATCATCTGAATATTTGTATTCAATCCCAAATCAATCTTTTGCCTATGCAGTGGACATTTAA 723 0.3541 MPIRIPNRVIQKKLWRIVGFISSFIGLLCYALSSSFKHLFGEWNLLKIIVYTIIELGFVVDLFNFFLGCLTVQLMKFNFMLSIIVVILCYSLRVLLDYQSQTETPRIEDHHHVTIEVDTANEVERRDDDDDRNGVQSDYSLGHQVTQSLRRRVSDDEYNWRKYEEKQVDINENQTSYYKCTIPNCPVKKKVERTIDGRVIGVLYNGNHNHHKPGLNIKRNSSSEYLYSIPNQSFAYAVDI 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1261 240 Gene3D WRKY domain 138 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal18g1261 240 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 3 218 IPR044810 GO:0003700
Lal18g1261 240 SMART WRKY_cls 154 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal18g1261 240 SUPERFAMILY WRKY DNA-binding domain 150 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal18g1261 240 Pfam WRKY DNA -binding domain 155 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal18g1261 240 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 3 218 - -
Lal18g1261 240 ProSiteProfiles WRKY domain profile. 153 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1261 Lal-Chr18 15253427 15257545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1261 155 230 WRKY Transcription Factor Family AT2G38470 45.000 1.26e-12 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal18g1261 WRKY 2.4e-18 CL0274