Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1250 ATGGCTTCACCGTTGGAGTGCTGGTCAAGCCGCACCACCACCACTACCACCGCTACCACCGATGATGACACCGTGGAGCAGGTCCTCATGAGGACCCACCACAGATCCGAGGCCATAACAACCCCTTCATTCTCTTCATCTTCTTCCTCAACAAAAGACTCATCTATGGTTCAAAAGAAATTACACAAGTTCGCCCGAAACGTTTCAGAGGCAATAAACTCGTTCAAAAACTCGCTTAACCTCGATTCTACTCGAGACCCAACTTCTTATAAGATCGAAGCTTCTAGAAAAATCACGTGGGGTACCGTTGTTAAGAACCTCACTGAACTCTATCCTGGAAGCCAGTTACCAGAGAAGCTCATGTGCAATATTCGCAAGCACTATGATTCCTTGCCTCTCAGTTATGGACAAGCAGAATTTGATATGAAAGATGTGTTTCTTCACATCAAGCTGATAGAGCAAGCATCAGAGACTGACCAACCTGCAATTTTGTTTCAAGAAGAAACTGATAATGATGGTGAAGTAGAGGGGTCTTTGTTGAAGCTCACTTTTGCTTGCAACTCTCCAATTTCATGGCCTGCAATGTCAAGTGCATTGGATAGTTCATCCATCAGCTGCAAGAAGATGCAGATCTTTGAGAGGAAAAGATTCACCCTCGGAGTTGTTATTCTTGTTTATCAGTCTGGGCAAGATAAATTGGTTAGAATGCGAGTCGAAAATGCGATAAAGTTTGCCATGAAGAAGCCCAGATCCAGTGCTGTGAAGCTTCCATTTGGACTTTGCGGATGTCAAGAGGAGAACTTCAGGGGGAGGGAACTTGGAGAGAGTGAAGATGATGGCGGTGACGCATGTTATGGAAAGGAGTTTGAGAATTCATGCCAAAATATTCAGCTTCAGATGCCTTTGCCTAGTTCATCTTTTATTGTATCAGTAGATGAGTGGCAGACAATTCATTCAGGTGCGGATAGTGTTGAGTTTACTGATCAGGTTGAACCTAATTCATATAAAGGGGTCTATATGGGGAAAAGGGTTGGGATTGAGAAACTTAAAGGTTGCGACAAAGGGAATTCTTATGAGTTTGAGCTTCGCAAGGATCTTCTGGAACTGATGACTTGTGGCCATAGAAACATTCTGCAATTTTGTGGTGTTTGTGTGGATGATAATCATGGGTTGTGTGTGGTTACAAAATACATGGAAGGTGGATCTGTTCATGACTTAATGTCGAAGAACAAGAAGCTTCAGACTAAGGATATTGTGAGAATAGCAGTTGATGTGGCTGAGGGAATGAAGTTTATGAATGATCATGGTGTTGCATATAGAGACCTTAATACTCAGAGGATTCTACTGGATAAGCATGGCAATGCTTGCTTGGGAGATATGGGTATAGTCACTGCCTGCACGAGTGTTGGAGAAGCAATGGAGTATGAAACTGATGTTATTTGTCCTATTGATAAAGCTACTCAGAAAGCTCGCACACTTCATGTGCTGCCAACAGAACAGATAATTGCAGGTGACCCTGAGAGTGTGACAGAGACATGGATGAGTAATGTTTACAGTTATGGGATGGTTATTTGGGAGATGGTAACCGGCGAAGTAGCCTATTCTGCATTTTCACCTGTGCAGGCTGCAGTGGGCATTGCTGCTTGTGGCCTTAGACCTGAGATTCCCAAAGACTGCCCCCAAACTCTGAAATATCTTATGACAAAGTGCTGGAACAACACCCCATCCAAACGTCCTCACTTCTCTGATATTTTAGCAATATTACTATGA 1770 0.4333 MASPLECWSSRTTTTTTATTDDDTVEQVLMRTHHRSEAITTPSFSSSSSSTKDSSMVQKKLHKFARNVSEAINSFKNSLNLDSTRDPTSYKIEASRKITWGTVVKNLTELYPGSQLPEKLMCNIRKHYDSLPLSYGQAEFDMKDVFLHIKLIEQASETDQPAILFQEETDNDGEVEGSLLKLTFACNSPISWPAMSSALDSSSISCKKMQIFERKRFTLGVVILVYQSGQDKLVRMRVENAIKFAMKKPRSSAVKLPFGLCGCQEENFRGRELGESEDDGGDACYGKEFENSCQNIQLQMPLPSSSFIVSVDEWQTIHSGADSVEFTDQVEPNSYKGVYMGKRVGIEKLKGCDKGNSYEFELRKDLLELMTCGHRNILQFCGVCVDDNHGLCVVTKYMEGGSVHDLMSKNKKLQTKDIVRIAVDVAEGMKFMNDHGVAYRDLNTQRILLDKHGNACLGDMGIVTACTSVGEAMEYETDVICPIDKATQKARTLHVLPTEQIIAGDPESVTETWMSNVYSYGMVIWEMVTGEVAYSAFSPVQAAVGIAACGLRPEIPKDCPQTLKYLMTKCWNNTPSKRPHFSDILAILL 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1250 589 SUPERFAMILY Protein kinase-like (PK-like) 335 588 IPR011009 -
Lal18g1250 589 PANTHER SERINE-THREONINE PROTEIN KINASE 1 589 - -
Lal18g1250 589 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 589 - -
Lal18g1250 589 MobiDBLite consensus disorder prediction 1 21 - -
Lal18g1250 589 Gene3D Transferase(Phosphotransferase) domain 1 330 588 - -
Lal18g1250 589 ProSiteProfiles Protein kinase domain profile. 311 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1250 589 Pfam Protein tyrosine and serine/threonine kinase 360 587 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1250 Lal-Chr18 15175012 15185238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1250 312 588 MAP Kinase Kinase Kinase AT2G17700 31.338 1.83e-42 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Lal18g1250 PK_Tyr_Ser-Thr 4.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1250 - - gmx:100801110 903.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1250 18 15175012 15185238 Lal18g1250 18 15175012 15185238 ECH
Lal18g1250 18 15175012 15185238 Lal22g0344 22 2191700 2195268 LSH
Lal5g0988 5 12139016 12143535 Lal18g1250 18 15175012 15185238 PCT
Lal18g1250 18 15175012 15185238 Lal5g0988 5 12139016 12143535 PCT