Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1248 ATGAATGTCGAAGAGTTCATAATCAGAAGCTATGAGGGACACTCTGATAGAGTTCAAGTGGAAGACCTTGAGAAAAGATGCAAGGTTGGGAAATCAGAAAGTGTATTAGACACTATGGGTGACCCCATTTGTAGGATCCGAAACAGCCCTATGTACATGATGCTGGTAGCAGAGCAGAACAATGAATTGGTTGGTGTCATTCAAGGCTCAATAAAGATGGTCATACTTAACAGTCATGAACCTCCAAAGGATTTGGTAAAGGTGGGCTATGTCCTAGGACTAAGGGTTGCACCCCATTACCGCAGAAAAGGCATTGCCTCTAGCCTAGTGCAAAGGCTAGAAGAATGGTTCAGTTCAAATGGTGTGGAGTATGCATATGTGGCCACAGAAAAAGAAAATCATGCCTCAATCACACTCTTCATGGACAAGTTTTGTTACACCAAGTTTAGGACTCCAGCTATACTCATAAACCCAGTAAATTATCACCACTCGTTTAGAATCTCATCCAATATTGAGATAGCTAGGGTAAACATTGAAAAGGCTGAATCCCTCTATAGAAGATTCATGGGGTCAACTGAGTTCTTCCCTAGTGACATAGAAAATATACTAAGGAACAATTTAAGCTTAGGGACATGGGTGGCTTATTTCAAAGAAGATAATAATAGTTTTGGACCAGATGGAAAAGTCCCTAATAATTGGGCTATGCTTAGTGTATGGAATAGTGGGGAAATTTTCAAGCTAAGGCTAGGAAAAGCACCTTTGTCTTGCTTATTATTCACAAAAGGTTGGAGCTTGATTGATAAAATGTTGCCATGCTTAAAGTTGCCGAACTTGCCTGATTTTTTTGACCCATTTGGGTTCTACTTCATGTATGGGATGTACCATGAAGGTCCACTCTCTGGGAAACTTGTGAGGGGATTGTGCAAGTTTGTGCACAACATGGTTGCAAAGTCCAAGGATGAGAATTGCAAGATTATTGTGACAGAAGTTGGAGGAAGAGATCATGACCTCATTCATCATATTCCACATCAGAAATTGCTCTCATCCCCTGACTTGTGGTGCATAAAGGCCTTGAAAAATGAAAGGACAAACACATCTCATCATCAGTTAACCTTAACCAACGCTCCTTCAAGATCTCTCTTTGTAGACCCACGAGAGGTTTAA 1164 0.4081 MNVEEFIIRSYEGHSDRVQVEDLEKRCKVGKSESVLDTMGDPICRIRNSPMYMMLVAEQNNELVGVIQGSIKMVILNSHEPPKDLVKVGYVLGLRVAPHYRRKGIASSLVQRLEEWFSSNGVEYAYVATEKENHASITLFMDKFCYTKFRTPAILINPVNYHHSFRISSNIEIARVNIEKAESLYRRFMGSTEFFPSDIENILRNNLSLGTWVAYFKEDNNSFGPDGKVPNNWAMLSVWNSGEIFKLRLGKAPLSCLLFTKGWSLIDKMLPCLKLPNLPDFFDPFGFYFMYGMYHEGPLSGKLVRGLCKFVHNMVAKSKDENCKIIVTEVGGRDHDLIHHIPHQKLLSSPDLWCIKALKNERTNTSHHQLTLTNAPSRSLFVDPREV 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1248 387 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 15 151 IPR016181 -
Lal18g1248 387 Pfam Acetyltransferase (GNAT) family 44 140 IPR000182 GO:0016407
Lal18g1248 387 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 208 IPR000182 GO:0016407
Lal18g1248 387 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 387 - -
Lal18g1248 387 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 387 - -
Lal18g1248 387 Gene3D - 9 144 - -
Lal18g1248 387 CDD NAT_SF 54 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1248 Lal-Chr18 15156226 15158109 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lal18g1248 Acetyltransf_1 3.7e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1248 - - gmx:100799507 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1248 18 15156226 15158109 Lal18g1248 18 15156226 15158109 ECH