Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1239 ATGAAGCAATTGACATCACCACCTTCCTCTTCATCCATCTTCAGTTTAGACCAATCATTCAAAAGTGCCACTGCAGGGTGTGCCACTGCAATCATGCACAGGATTCTATGTTCTGGTGGTCTTCCAACACACTCATCAGACCAAAACCAAATCATAGAGCTTGATTCAATGCAAAGTGGTAAAGTTCAAGAATTTAAGGCTAAGAAGAAAACTGAAGCTGTTACTACACATGGGAATGTAGTGGCAAGGTTGATGGGCTTGGACTTAAAGGTAGAGATACCCTTTGAAGCAAAGAATCCAACTTCACTTTTGCATAGCAAATCCATGAATTCTGTGGATTACTTGGGAGAAATCAAACAAGTGAAGGGCCTTCATAGGTATGATAGTAAGTCCTCGTTGTCGTTTCGTGACGCACCGACTTTCGATTTGTTTGAAAATGAGAACTTCTTGGTACTCAGCTTTGAAGGTGGGAGTGAAAGTAAGGAATTCAAGTCCAAAGGGAGAAAAAATGAAAAGGGTTATGCAGAGTTGAAGCAGAAACAAAGAGAGAGACGTGAGTTGAAGAAGAATAAAAGAGAAACTGTACATGATGAGAAGAAGGGGAACTTGAGAAAAAGTGTGTGTGACATGTCTTCTATCAATGTCGGAAATGATGGTGAACTTGGAAACGTTGCTAATATTTCACTTATGTTGAAGGATTCAGAAATGGTTACATTTTCACAATCCTTGAAGTACAAGGAAATTCATAATGGTGAGAAAGTGAAAAAGAGGAAGAAGAGAACAACATTGTGCACAGACAAGAAGGTAGAAACTGAATGCAGTTCAGAAGATTCAAGCCCAGTTTCTGTCTTTGATTTTGAGAGAGAAGCTCATGGAACAGATGTAGATTCTTGTGGTGTTGGTTTGGGCTGGAGAAGAAAATTGTCACCAGAGCTTGAAAAAGACCAGCTCTTTAGTCTGAATTCTGATAGTAACTTGATAATTGAAGAGAGGAAGGTTAAGACTAAGAACAACAACAATGAAAGATCAAAGAAAAAAGAGAAGCAAAGCCAAGAGTGTGTAAATATTTGGGGTGAAATTTGCAGGCTAGTTGAAGATGAATTGGTTGGATCAAATCATCTAAAAGAAGAGATGAGGAAACAAAGTGATCTTGCAAGTATAAGTGCAGATTTTGAGTCAGAAATTTTTGATGAATTGTTAAATGATCTGATAGATCAATTTGTTGGCAGTCCCTTGAAAACATTGCAACTTCAGAACTTGTAA 1263 0.3816 MKQLTSPPSSSSIFSLDQSFKSATAGCATAIMHRILCSGGLPTHSSDQNQIIELDSMQSGKVQEFKAKKKTEAVTTHGNVVARLMGLDLKVEIPFEAKNPTSLLHSKSMNSVDYLGEIKQVKGLHRYDSKSSLSFRDAPTFDLFENENFLVLSFEGGSESKEFKSKGRKNEKGYAELKQKQRERRELKKNKRETVHDEKKGNLRKSVCDMSSINVGNDGELGNVANISLMLKDSEMVTFSQSLKYKEIHNGEKVKKRKKRTTLCTDKKVETECSSEDSSPVSVFDFEREAHGTDVDSCGVGLGWRRKLSPELEKDQLFSLNSDSNLIIEERKVKTKNNNNERSKKKEKQSQECVNIWGEICRLVEDELVGSNHLKEEMRKQSDLASISADFESEIFDELLNDLIDQFVGSPLKTLQLQNL 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1239 420 Coils Coil 170 197 - -
Lal18g1239 420 MobiDBLite consensus disorder prediction 179 200 - -
Lal18g1239 420 PANTHER - 13 416 - -
Lal18g1239 420 PANTHER OS05G0128300 PROTEIN 13 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1239 Lal-Chr18 15087202 15089061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1239 21 404 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 30.576 9.18e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1239 - - gmx:102660974 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1239 18 15087202 15089061 Lal6g0381 6 2437595 2439839 LSH