Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1213 ATGGAAGCAATAGAGAAACACAGAGATACACCAATAATACCAAATGTGAAGAGAATTGCACAAAGACACAAGAACAGAATAAGCTTTTCTGCTAGTCTTCCCAATGATGTGCATGGTGCATTTGCACATAGTTTTTGTGCAGTAAGTTACTCTGAAAACCCTTTTGTTGATATAAGGGAATCAATTCTTGAGATGATTGTGAATGTTGGAGTTCATGATTGGGATGAAATGGAGGAGTTGGTTTACTGTTATATTGCTCTCAACTCGACACAACTTCATGGTATTATATGTCAAGCATTTCTTGATCTTTGTGCTAATTTGGATTTAAGTTATTTGTTAAATTGA 345 0.3478 MEAIEKHRDTPIIPNVKRIAQRHKNRISFSASLPNDVHGAFAHSFCAVSYSENPFVDIRESILEMIVNVGVHDWDEMEELVYCYIALNSTQLHGIICQAFLDLCANLDLSYLLN 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1213 114 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 20 105 IPR038933 GO:0045892
Lal18g1213 114 Pfam Transcriptional repressor, ovate 51 107 IPR006458 -
Lal18g1213 114 PANTHER OVATE FAMILY PROTEIN 5 20 105 - -
Lal18g1213 114 ProSiteProfiles OVATE domain profile. 47 106 IPR006458 -
Lal18g1213 114 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 48 107 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1213 Lal-Chr18 14949990 14950334 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lal18g1213 Ovate 5.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1213 - - ming:122077991 122.094