Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1211 ATGAATTCCTTACACCATTTCATCTCCATATTTTGGTTATTCAATCTTCTAGCCTCCATAATTCCATACCAAGTTGAAGTTTGTTCAGCAAGTAATCTTCTAAATCCAATTAATGCAACCAAACACTTTTCCTTCCCTGATTTCAACTTCACCAATAAACCATTACTCTCCCATAGTGTGTGTCTTCTTGGCAGTGCCAAATTCTCAGAACAAAAGGCTTCTATTCAATTCTCAAATGAACTACAAGGCAAAAATATCAAATATCAAGAAGGTAGAGGAATATACTCCTTCCCAATAAGGTTGTTAAATCCAAGTACAAACATTTCAGCTTGTTTTGAAACTACCTTTGCTTTACAACTCAGCAATTCTACTAAAAATCAAACAGGTTATGATGGTGGAAGTGCCTTAAGTTTCATTATAGTCCCTGATGAGTTCACTGTAGGAACATCAGGGTCATTGATTGAAATGCTGAATAATACTTGTGAGAAAGATTATAAGGCAGTGGCAATAGATTTTACTACAACAAAGAAAGCTGCACCAGAAGATCCAAATGACAACAATTTAGGTACAACAAAATCTACTAGAATTATCAATGTTTCTGATCTTGGAGTTGCCCTTGAAGATGGTTGTGTTCACTATATATGGATCAACTATAATGGTCCTAAAAAAATAATGGACATTCGTTTAGGAACAAGGCAAAGTAGATTTCCTTTTAAGCCTATCTATTCAGAAGCAGTGGATCTCTCTCCATATCTCAATGAGTACATGTTTGTAGGGTTCTCAGCTTCCACAGGTAGCAGTAATCAAATCCACAACATACTCTCTTGGAATTTCACTTCCACCAGCCACGCTTTTCTTCGCTTCCCTTCGGCCGAAAGTTGCGACTCGAAAATCTCACTTCAGAACACCACAGCAGGAAAAAAACCTGACAAGAAGTCTAGTAAGGATGATATTCCACTAGGCTTTTTTATTTTTGTGGTTGTGGTGGCTCTCGCTTCGGTCGTAGGTTTTAGCTTTATCTTTAGGCATAGAAGAAATGCAGCCAAACCAAACAATTCATCGGAGGCGAAAGTTCTTCGGCCAAGTCCTCCAAACAAACCGTCTCAATTAACTTTTTCTGAAATTTCCTTGGCAACTAGATCATTCAATGGTGAGATAGAGTTGCTTGGTGCTGATACTAGAGGAAAGTTCTATAAGGGAAAGCTTTCTAATGGAAGCAATGTAGCAGTGAAAAGATTCTCAGATCAGTTTCTCAACACATACATCTCTGATAGGAAACGTTTCTTGAAGGAAATCACAACCATTAGTAACATTCGCCACCCGAATTTGGTTCTTGTTAAAGGCTGGTGTGATGAAAATAATCAGATCATGGTGGCCTATGATTTTGTCCACAATGGCAGCCTAGATAAATGGCTATTTAGTGATGGTGTTCTTCCATGGGCACGCCGATTAAAGATTATTAAAGACGTAGCCGATGGATTGAACTTCCTTCACACAAAGAAACTAGCCCACAAAAACTTGAGTTGCAGCAGTGTGTTTCTTGATCTTAGTTTTAGAGCTGTTTTGGGTGATTTTGGGTTTGTACTAATGGGAGCAGAATCAAAGATGTTTGATTTATCAGTTAGTGTTTGTGCTGATGTGTTTGAATTTGGAGTCCTTGTATTGGAAGTAGTAGCTGGAAGGAGAAGGGTGGAGATAAATGAGGAAAACCCAGAAGAGAAGAACTTATTGGATTTTGCTTGGAACTTGCATCAAACTAATGACAAAGTGAGGCTGGTGGATAGAAAAATGGGACCATTGATCAGCACCGAGCACGCGATTCGTGTTCTCGAAATCGGATTGCTTTGCACTTTGAATAAGAAGAAAGGAAGGCCCTCTATGCAGGAAGTGGTGGAGTTTCTTCTTCACATGGATAAGCCAATTCCTAATCTGCCAACAACTCACCCTGGTATTTTGCTCCCTTATAAGTTAAAATAG 1977 0.3875 MNSLHHFISIFWLFNLLASIIPYQVEVCSASNLLNPINATKHFSFPDFNFTNKPLLSHSVCLLGSAKFSEQKASIQFSNELQGKNIKYQEGRGIYSFPIRLLNPSTNISACFETTFALQLSNSTKNQTGYDGGSALSFIIVPDEFTVGTSGSLIEMLNNTCEKDYKAVAIDFTTTKKAAPEDPNDNNLGTTKSTRIINVSDLGVALEDGCVHYIWINYNGPKKIMDIRLGTRQSRFPFKPIYSEAVDLSPYLNEYMFVGFSASTGSSNQIHNILSWNFTSTSHAFLRFPSAESCDSKISLQNTTAGKKPDKKSSKDDIPLGFFIFVVVVALASVVGFSFIFRHRRNAAKPNNSSEAKVLRPSPPNKPSQLTFSEISLATRSFNGEIELLGADTRGKFYKGKLSNGSNVAVKRFSDQFLNTYISDRKRFLKEITTISNIRHPNLVLVKGWCDENNQIMVAYDFVHNGSLDKWLFSDGVLPWARRLKIIKDVADGLNFLHTKKLAHKNLSCSSVFLDLSFRAVLGDFGFVLMGAESKMFDLSVSVCADVFEFGVLVLEVVAGRRRVEINEENPEEKNLLDFAWNLHQTNDKVRLVDRKMGPLISTEHAIRVLEIGLLCTLNKKKGRPSMQEVVEFLLHMDKPIPNLPTTHPGILLPYKLK 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1211 658 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2-LIKE 39 652 - -
Lal18g1211 658 CDD lectin_legume_LecRK_Arcelin_ConA 42 281 IPR001220 GO:0030246
Lal18g1211 658 ProSiteProfiles Protein kinase domain profile. 383 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1211 658 SUPERFAMILY Protein kinase-like (PK-like) 362 636 IPR011009 -
Lal18g1211 658 PANTHER - 39 652 - -
Lal18g1211 658 Pfam Legume lectin domain 42 282 IPR001220 GO:0030246
Lal18g1211 658 Pfam Protein tyrosine and serine/threonine kinase 387 528 IPR001245 GO:0004672|GO:0006468
Lal18g1211 658 SUPERFAMILY Concanavalin A-like lectins/glucanases 42 282 IPR013320 -
Lal18g1211 658 Gene3D Transferase(Phosphotransferase) domain 1 463 642 - -
Lal18g1211 658 Gene3D - 39 285 - -
Lal18g1211 658 Gene3D Phosphorylase Kinase; domain 1 343 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1211 Lal-Chr18 14940235 14942211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1211 47 643 Receptor kinase-like Gene Family AT3G55550 30.781 2.78e-72 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal18g1211 Lectin_legB 6.4e-35 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1211 - - lja:Lj2g3v2196570.1 803.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1211 18 14940235 14942211 Lal22g0045 22 267962 269989 LSH
Lal18g1211 18 14940235 14942211 Lal6g0410 6 2575129 2577168 LSH