Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1201 ATGGAAGAGTTCATAAATTCTATGAAACATGCTTTTGGATTAGCACGAAACCTTGAATTAGAACTACCAAACATGTCCAACCAATCTCTTCATATTCTATGTTTGTCCATTGATGATGTAATGAAGGCATTCAATGGTGCCAAAGAGAGGCTATTATTGATGATGATGTCTCAACAAGACCAAACAATAACAGCATCTTCCTTTGTTCCAATGTTGAGTACTCAGCATCATGCAACAACTTCAATGGTAACAAGTTTTATGGACATGTTTCAAATGCAACAATTATCTTTTGATCATGTGAGGGTTTTGCATGAAAATAAGATCATAGGTGGTGTTGATATTCAGAAGTTAAGGAATAAGGGTACGTTGAAGATTGGTGAAAAGGGTGAGAGGGATTTGGAACGTTATGTGAGATCAAAATCTGAAGGAAATGTGCAAGGAATAGAAGCATCATCAACCCCACGACCTAGAAAAAGCAGGAAGAATGATTGTGTGAAGAAAACAATAATAGTTCCAGCACCACAGGTTGGAAACACAGAGATACCACCAGAGGATGGCTTCACTTGGAGAAAATATGGCCAAAAAGAAATACTTGGCTCCATGTACCCAAGAGGTTACTATAGGTGCACTCACCAGAAACTATATGATTGCCAAGCCAAGAAACTGATACAAAGAGTTGATCACAACCCTAACATGTTTGAAGTAACATACCGAGGTGAACATACATGTCACATGTCCTCAACAGCACCATCATCATATCCACTATTAGTGAATATCTCAAAGGACATGACTCAAACTATCATGTCCCCTCACTTATCTCCATCATCATCAACATCAATTCCCGGGTTGCTAACCTCGGTGAACCTCACCCTCTGTGATTGTGCTAATACCAGCTCCGATCCCTTTACTTCAAAATATGATGGTGATTATCTGGTGGGTGATTTGGCTGATGATTTGTTTAATTGGGGTGGTAGTAGTAATAACAGTATTGAACCACTATTCCCTGATTCCAAATGA 1017 0.3894 MEEFINSMKHAFGLARNLELELPNMSNQSLHILCLSIDDVMKAFNGAKERLLLMMMSQQDQTITASSFVPMLSTQHHATTSMVTSFMDMFQMQQLSFDHVRVLHENKIIGGVDIQKLRNKGTLKIGEKGERDLERYVRSKSEGNVQGIEASSTPRPRKSRKNDCVKKTIIVPAPQVGNTEIPPEDGFTWRKYGQKEILGSMYPRGYYRCTHQKLYDCQAKKLIQRVDHNPNMFEVTYRGEHTCHMSSTAPSSYPLLVNISKDMTQTIMSPHLSPSSSTSIPGLLTSVNLTLCDCANTSSDPFTSKYDGDYLVGDLADDLFNWGGSSNNSIEPLFPDSK 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1201 338 Gene3D WRKY domain 173 246 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal18g1201 338 ProSiteProfiles WRKY domain profile. 184 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal18g1201 338 SMART WRKY_cls 183 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal18g1201 338 SUPERFAMILY WRKY DNA-binding domain 181 245 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal18g1201 338 PANTHER WRKY TRANSCRIPTION FACTOR 55 1 265 - -
Lal18g1201 338 MobiDBLite consensus disorder prediction 138 162 - -
Lal18g1201 338 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 265 IPR044810 GO:0003700
Lal18g1201 338 Pfam WRKY DNA -binding domain 184 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1201 Lal-Chr18 14867113 14870704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1201 1 335 WRKY Transcription Factor Family AT2G40740 32.353 2.68e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal18g1201 WRKY 2.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1201 - - lang:109360324 412.535