Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1198 ATGCCGAATCCCGAGTCACACCGTAACTACCCCCGGTCCAAGTCTCGACCGTCAACTTCATCATCCGTACCGGTTCGCAACCCGGTTCGACCGAGAGTTCCGCTTCGACAGTTACTTCGTGTAGCATCAGTAGCAAGTGGTATCCAATTCGGTTGGGCCTTACAACTCTCTCTATTAACCCCTTACGTTCAGCAACTTGGGATCCCTCACCAATGGGCTAGCATCATCTGGCTCTGTGGTCCAGTCTCTGGTCTATTTGTTCAGCCTTTGGTCGGTCATATGAGTGATAAGTGTACTAATCGCTTTGGTCGCCGGAGACCGTTTATTTTGGTTGGCGCTGTTTCGATCATCGTTGCTGTTGTTATTATCGGCTATGCTGCTGATATTGGTTGGTTGCTCGGTGATACTGTGGCTTCTCGACCGTGGGCGATAACCGTTTTCGTTATCGGGTTTTGGATTCTTGATGTTGCTAATAACGTTACTCAAGGTCCTTGTAGAGCTTTGCTCAGTGATCTAACTAGCAATGATCCTCGAAGGACACGTGTTGCAAATTCTTATTTCTCCTTGTGCATGGCTATTGGTAATATTCTTGGCTATGCAACTGGATCATACAGTGGTTGGTACAAGATTTTTACTTTCACACTTACCCCTGCATGCTCTATTAGTTGTGCAAATCTCAAGTCTGCTTTCTTTCTCGACATTGCTTTCATTGCGGTCACCACATATGTCAGCATCATGGCAGCTCATGAAGTGCCTCTGAATTCGGGTGGGGCTTCCCCTGCTGAAGAAGGGGGAGGGGAGTCCGGTGAAGCTTTCATGTGGGAGTTATTCGGGACAGTCAAATATTTTTCAACCCCTGTATGGATAATACTGTCTGTTACTGCTCTAACATGGCTTGGGTGGTTCCCGTTTATCCTCTTTGATACAGATTGGATGGGTCGGGAGATTTATGGTGGTGATCCAATTGAAGGAGGCCTTATTTATGATACTGGGGTTAGATGGGGAGCACTTGGTTTATTGCTTAATTCAGTTGTTCTTGGAATAACATCATTGTTCATGGAGAGGCTATGCAGGAAGCGGGGGGCTGGTTTTGTGTGGGGAATTGCAAATATCGTAATGACAGTATGTTTTCTTGCAATACTTGTAGTAACCTATGTGGCAAATAGCATTGGCTACGTAGGCAAAGATTTACCACCAGTTGGCATTGTGATAGCTGCATTGACAATCTTTACCATTCTTGGGTTTCCGTTGGCGATCACTTACAGTGTTCCATATGCCTTAATTTCCACGCATATTGAGTCATTGGGACTTGGCCAAGGATTATCTATGGGTGTTCTAAATCTGGCAATAGTGTTCCCACAGATGTTGGTGTCCGTAGGAAGTGGACCATGGGATCAACTATTTGGTGGAGGAAACTCCCCGGCCTTTGCAGTGGCAGCTGTTGCAGCCCTTGTCAGTGGACTCATAGCTCTCTTGGCTATTCCACGATCTGGTGGACGCAAGCCCCGAAGCCATGCATGA 1521 0.4668 MPNPESHRNYPRSKSRPSTSSSVPVRNPVRPRVPLRQLLRVASVASGIQFGWALQLSLLTPYVQQLGIPHQWASIIWLCGPVSGLFVQPLVGHMSDKCTNRFGRRRPFILVGAVSIIVAVVIIGYAADIGWLLGDTVASRPWAITVFVIGFWILDVANNVTQGPCRALLSDLTSNDPRRTRVANSYFSLCMAIGNILGYATGSYSGWYKIFTFTLTPACSISCANLKSAFFLDIAFIAVTTYVSIMAAHEVPLNSGGASPAEEGGGESGEAFMWELFGTVKYFSTPVWIILSVTALTWLGWFPFILFDTDWMGREIYGGDPIEGGLIYDTGVRWGALGLLLNSVVLGITSLFMERLCRKRGAGFVWGIANIVMTVCFLAILVVTYVANSIGYVGKDLPPVGIVIAALTIFTILGFPLAITYSVPYALISTHIESLGLGQGLSMGVLNLAIVFPQMLVSVGSGPWDQLFGGGNSPAFAVAAVAALVSGLIALLAIPRSGGRKPRSHA 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1198 506 CDD MFS_SLC45_SUC 38 492 - -
Lal18g1198 506 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 10 504 - -
Lal18g1198 506 Pfam MFS/sugar transport protein 53 199 - -
Lal18g1198 506 MobiDBLite consensus disorder prediction 1 26 - -
Lal18g1198 506 PANTHER SUGAR TRANSPORTER 10 504 - -
Lal18g1198 506 MobiDBLite consensus disorder prediction 1 28 - -
Lal18g1198 506 SUPERFAMILY MFS general substrate transporter 36 501 IPR036259 -
Lal18g1198 506 Gene3D MFS general substrate transporter like domains 35 494 IPR036259 -
Lal18g1198 506 TIGRFAM GPH_sucrose: sucrose/H+ symporter 33 497 IPR005989 GO:0005887|GO:0008515|GO:0015770
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1198 Lal-Chr18 14848913 14854681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1198 8 502 Sucrose Transporter Gene Family AT1G09960 69.138 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1198 K15378 - gmx:100820483 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1198 18 14848913 14854681 Lal18g1198 18 14848913 14854681 ECH