Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1194 ATGGAGAAGATTCAACCCTTCTCTTCCGATCCCAATTCCCTCGACACCTCTCCCACTTCACGCGATGTTGTTGTCGACAACAACAACAACAACCACTCCTCCTTCGATGAACCTCATTCCACCACCACCACCACCATCAAGGTCAAATTCATCTGCAGCTATGGCGGTAAAATCCAACCGCGTCCTCATGACAACCACCTCTCCTACGTCGGCGGCGATACCAAAATACTCGCCGTCGATCGCAACATCAAATACTCTGCTTTCATGACCAAGGTCTCTTCCCTCGCCAACAATGCCAATCTCTGCTTCAAGTACCAACTCCCTGGCGAAGATCTCGACGCTCTTATCTCCGTCACCAACGACGAAGATCTCGATAACATGATGATTGAGTATGATCGCCTCTCACGCGCTTCTTCTACCAAACCCGCTAGAATGAGGCTCATCCTATTCCCTCTCATCAACAATGCTGTTTCTGTTTCTGTTTCTTCTCCGGTTCAGAATTTCGCTCCAACTGAACCGAAACCGGAGCGTCAGTGGTTCGTTGACGCGCTCAATTCGGTTCAGATTCCGAATCTAGAACGTTCTTCTCCGCAGCAGAATCCGGATTTTTTGTTTGGATTCGATAAAGTGTATCCGAAACCGCCAGACCCGGCGCCATCACCGAAGGTTTCGGATATCGCGGCGAAGGATTCAGAGTGTGGGCCCGAGGAGAAAAAAACGGTTGAAGAAAACGATGCTGCTGCGGCTTCTGCACAGAAGCAGATCCAAGAGGAGTTACAGAAAATGCAGATTGCGAACAACAATGAACAGCAGCAACAACAACAACAGCAACTGCTTCTTCATCAGTTGAAAATCAACGAAGAAAACGGTGTGGACTGTTACACTCAGAAGAATCCAGAAAAGGTGAATCCATTACCTGCAAATAATTCTCATTTGCAGGTTCATCCCGGTCCAGTTCATGCTTCTTTTTTGCCAAGTGGTGGTTATCCTGAACAGGTTTATCTGATTCAAACCGCGTCCGGTTTATATCAAGCGGTTCGGCCTGTGACTGTAACTGCTGCACCATTGGGGCCTACTTACTATGCTCTGCCGAGGATGGTTCCGGCGTCAAATATCGCTGGTGCTGCTTACAATGGTGGTTCACAGGTTGGGGTGGTGAACGAGAATGGCTATTCACAGGTTGGGGTTCCACATTTACCTGAGAGGTCTGTTGGCTGGAATTGA 1224 0.4861 MEKIQPFSSDPNSLDTSPTSRDVVVDNNNNNHSSFDEPHSTTTTTIKVKFICSYGGKIQPRPHDNHLSYVGGDTKILAVDRNIKYSAFMTKVSSLANNANLCFKYQLPGEDLDALISVTNDEDLDNMMIEYDRLSRASSTKPARMRLILFPLINNAVSVSVSSPVQNFAPTEPKPERQWFVDALNSVQIPNLERSSPQQNPDFLFGFDKVYPKPPDPAPSPKVSDIAAKDSECGPEEKKTVEENDAAAASAQKQIQEELQKMQIANNNEQQQQQQQQLLLHQLKINEENGVDCYTQKNPEKVNPLPANNSHLQVHPGPVHASFLPSGGYPEQVYLIQTASGLYQAVRPVTVTAAPLGPTYYALPRMVPASNIAGAAYNGGSQVGVVNENGYSQVGVPHLPERSVGWN 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1194 407 MobiDBLite consensus disorder prediction 1 40 - -
Lal18g1194 407 SMART PB1_new 62 152 IPR000270 GO:0005515
Lal18g1194 407 MobiDBLite consensus disorder prediction 229 244 - -
Lal18g1194 407 PANTHER OS05G0427100 PROTEIN-RELATED 1 382 - -
Lal18g1194 407 CDD PB1_UP2 51 150 - -
Lal18g1194 407 Gene3D - 68 150 - -
Lal18g1194 407 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 1 382 - -
Lal18g1194 407 MobiDBLite consensus disorder prediction 192 250 - -
Lal18g1194 407 Pfam PB1 domain 64 151 IPR000270 GO:0005515
Lal18g1194 407 Coils Coil 248 275 - -
Lal18g1194 407 SUPERFAMILY CAD & PB1 domains 63 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1194 Lal-Chr18 14814213 14815436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1194 36 202 MAP Kinase Kinase Kinase AT5G57610 40.698 1.73e-28 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1194 - - lang:109338577 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1194 18 14814213 14815436 Lal18g1194 18 14814213 14815436 ECH
Lal18g1194 18 14814213 14815436 Lal22g0394 22 2575580 2579059 LSH