Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1170 ATGTGTGTCGAAGAACCAGAGAAATTGGTCAATAGTATTCATGAGAATATCTTGGAACAAGTAGAAGAGAATGTCATTGACTCTACACCACACTTGGGAATGAAGTTTGAATCGGAGGTTGCCGCCTATGATTTTTATAACGACTACAGTCAGAAACGTGGTTTTGGTATTCGTCGAGAATATGCAAATAAAAGCAGAAAAGATGGAGTTGTGACTTCAAGAAAGTTCACATGCTCCAAAGAAGGAAAACAAGGTGTTGACAAACGAGATCACTTGACAAAACAGTCAAGAGCAGAAACCAGAACAGGATGTGAAGCACATATGGTTATTTCACTTGACCGAAATATTAATAAATACAATGTTGTGAGATTTGTTGCTGAACATAATCATCCTCTTCAACCACCTGCATATGTTCACATGATTCGCTCTCATCGACACATCTGA 444 0.3829 MCVEEPEKLVNSIHENILEQVEENVIDSTPHLGMKFESEVAAYDFYNDYSQKRGFGIRREYANKSRKDGVVTSRKFTCSKEGKQGVDKRDHLTKQSRAETRTGCEAHMVISLDRNINKYNVVRFVAEHNHPLQPPAYVHMIRSHRHI 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1170 147 Pfam FAR1 DNA-binding domain 44 134 IPR004330 -
Lal18g1170 147 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 3 146 - -
Lal18g1170 147 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 3 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1170 Lal-Chr18 14613702 14614145 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal18g1170 FAR1 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1170 - - lang:109354032 264.618