Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1168 ATGGGAGAAGATTGCAGAACTTGGATGCCTCGAGTGCATTTTGATTGGCAATCACCCAATTTGAGTTCGATTGGTGCTCCCGATGATAAGGGAAAACAAAATGGCGTTTCTAATGCGATACACTCTGGTGTCGATATGGGCACAAGGAATGTGATCATGCCTGCTTATACGTCCTCTGTGTTACCGCACTTGCAGTTTGGACATCCTAATGAGCCTCGTGGATGGTTTTACTGCTTGCCTCGATTTCGACAGACATTTACCCCTTCTCCGAACCTTACTACTGAGGAAAAACAACCTGCTGGTCATGTGAAAGGTTTTGAAGGGGAAATTAGAGCCGACGAGGGCTCAGGTTTCACACAGAAGAGACTCTTGGTGGTTGATCAAACAGCTGATCAAACAACTCTCATTTATAGTTCTAAATTTGGGAATCCTGTTTGCCGTGGTTCTTGGGATTCGAAACAGCACGGTTCTAACAATTTGAATGGGCGTGAACCTTATTTAAGAAGAGATTTGAATCATGTGATTGAACCAAGTTTTGCTGATAAAGGTGACGATGATAAGGGAACTGACATTGAAAGTGAGATGCATGAAGACACAGAAGAAATAAATGCATTGCTTTACTCGGACAGTGATGGTTATTCTACCGAGGATGATGAGGTTACTAGTACAGGGCATTCACCAAGTACCATGACCAGCCATGGTAACCACGAACCCTGTAGCGGAACCTCCAAAGAAGAAGTTGCCAGTTCGGCCGGAAGATCAAAGAAGCGGAAGCTAAGTGATGGTGCTTATGATGATGACATTCAAGTCATGGACACTGCTGGTTCTCAGAATCTGAACAGAACCTTCGACATGGTAGTCGATGATGCAGAATCAAGATGCTCGAGTGGCAACAATATTCAAGGGTCAGGTGAAATGGGTTCCTTGTCGGGCATTAAGAAGATGAGAAAGGATAAGATACAAGATGTTCTAAGCATTCTCCAGAGCATGATTCCTGGCGGGAAGGAAATGGGTCCGGTTGAGCTTATCGATGAAGCCATACGATGCTTGAAATCCTTGAAACTCAAGGCTAAAGCTCTTGGACTTGATGCTTTCTAA 1098 0.4426 MGEDCRTWMPRVHFDWQSPNLSSIGAPDDKGKQNGVSNAIHSGVDMGTRNVIMPAYTSSVLPHLQFGHPNEPRGWFYCLPRFRQTFTPSPNLTTEEKQPAGHVKGFEGEIRADEGSGFTQKRLLVVDQTADQTTLIYSSKFGNPVCRGSWDSKQHGSNNLNGREPYLRRDLNHVIEPSFADKGDDDKGTDIESEMHEDTEEINALLYSDSDGYSTEDDEVTSTGHSPSTMTSHGNHEPCSGTSKEEVASSAGRSKKRKLSDGAYDDDIQVMDTAGSQNLNRTFDMVVDDAESRCSSGNNIQGSGEMGSLSGIKKMRKDKIQDVLSILQSMIPGGKEMGPVELIDEAIRCLKSLKLKAKALGLDAF 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1168 365 MobiDBLite consensus disorder prediction 210 260 - -
Lal18g1168 365 MobiDBLite consensus disorder prediction 217 248 - -
Lal18g1168 365 PANTHER TRANSCRIPTION FACTOR BHLH145 1 363 IPR037546 -
Lal18g1168 365 PANTHER TRANSCRIPTION FACTOR BHLH145 1 363 - -
Lal18g1168 365 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 304 353 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1168 Lal-Chr18 14573210 14574307 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1168 74 358 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 32.753 1.40e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1168 - - gmx:100812109 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1168 18 14573210 14574307 Lal18g1168 18 14573210 14574307 ECH
Lal18g1168 18 14573210 14574307 Lal17g0384 17 2579654 2582953 PCT
Lal17g0384 17 2579654 2582953 Lal18g1168 18 14573210 14574307 PCT