Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1166 ATGGTGGAAGAAAGAAGAGAAGAAAAAGAAGAGAAAAGAACCATAAAGAAAACCCTTTTACTTCTAAACTCAATATTTCTAGCCATAGGAACTTCCGGTGGTCCCCTCGTAATGCGTCTCTACTTCATCCATGGTGGTAAACGCATCTGGCTTTCAAGCTTTCTCGAAACTGCTGGTTTTCCCATCATTCTCATTACCATAATCATCTCTTACCTCCACCGTCTCTACCACCACAACCGCCGCCGCCGCCATAACACCACCACACAAATAATAAAACCAAACCTCATCTATATGAAGCCGCCGTTATTTTTCGCCTCCGCTATCGTTGGCATACTTACCGGCCTCGACGGTTATCTCTACGCTTATGGGGTATCTCTTCTTCCCGTGTCAACTTTTTCTCTCATTCAAGCTACCCACCTTGCTTTCACTGCCATCTTCGCTTTCTTTTTAGTGAAGCAAAAGTTCACTGCTTACTCCGTCAACTCCATATTGTTGCTGACCATTGCGGCGGTGGTTTTGGCCTTCCATTCAAGTGGAGATCGTCCTTCTGGTGAGTCCAGAAAGCAGTACACGATAGGGTTTGTTATGATAATGGCGGCTGCGGCGTTGTATGGGTTTGTTTTGCCGTTAGTGGAGTTGGTGTATAAGAAGTGTAAGCAAACTATCACTTACTATCTCGTATTGGAGTTTCAGCTAGTTATGTGTTTCTTTGCTACTTTGTTCTGCACTATTGGGATGATAATAAGCAATGACTTCAAGGTGATTGCACGAGAAGCCAGGGATTATGAGCTTGGGGAAACAAAGTACTACGTTGTGCTGGTTTGGAGTGCTTTGATGTGGCAGTTTTTTTACTTAGGAGCAATGGGAGTTATCTTTAGCTCTTCATCTTTATTGTCTGGTATTATAATTGCAGTGTTTCTTCCTGTAACACAAGCCTTGGCTGTTGTTTTCTACAAAGAGAAATTTCAAGCTGAGAAGGGTGTTGCTTTGGTACTTTCTCTTTGGGGGTTTGTGTCTTATTTTTATGGTGAGATTAAACAAGCAAGGAAGAAAAACAAGAATGGTTGCACAGAAACACAGCTGCATCAAACTCTTTCTCCTAATCCATGA 1110 0.4261 MVEERREEKEEKRTIKKTLLLLNSIFLAIGTSGGPLVMRLYFIHGGKRIWLSSFLETAGFPIILITIIISYLHRLYHHNRRRRHNTTTQIIKPNLIYMKPPLFFASAIVGILTGLDGYLYAYGVSLLPVSTFSLIQATHLAFTAIFAFFLVKQKFTAYSVNSILLLTIAAVVLAFHSSGDRPSGESRKQYTIGFVMIMAAAALYGFVLPLVELVYKKCKQTITYYLVLEFQLVMCFFATLFCTIGMIISNDFKVIAREARDYELGETKYYVVLVWSALMWQFFYLGAMGVIFSSSSLLSGIIIAVFLPVTQALAVVFYKEKFQAEKGVALVLSLWGFVSYFYGEIKQARKKNKNGCTETQLHQTLSPNP 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1166 369 PANTHER PURINE PERMEASE 6 365 - -
Lal18g1166 369 Pfam Purine nucleobase transmembrane transport 19 350 - -
Lal18g1166 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 100 178 - -
Lal18g1166 369 PANTHER OS09G0467300 PROTEIN-RELATED 6 365 IPR030182 GO:0015211|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1166 Lal-Chr18 14544431 14546392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1166 17 353 Organic Solute Cotransporters AT1G28220 56.380 3.49e-139 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1166 - - gmx:100804831 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1166 18 14544431 14546392 Lal18g1166 18 14544431 14546392 ECH
Lal18g1166 18 14544431 14546392 Lal17g0392 17 2620361 2622064 PCT