Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1161 ATGGATCGTTATGAGATTCTCAAAGATATTGGGTCTGGGAGTTTTGCTGTAGCCAAACTTGTTAGAGACAACTTCACCAAAGAGTTATTTGCAGTCAAGTTTATTGAGAGAGGCCACAAGATTGATGAGCATGTCCAGAGGGAAATCATGAACCATAGATCATTGAAGCATCCCAATATTGTTAGATTCAAAGAGGTCCTTCTGACTCCAACACATCTTGCCATAGTAATGGAGTACGCCGCTGGAGGAGAACTCTTCGAGAGGATATCAAATGCTGGTAGATTCACTGAGGATGAGGCAAGATTTTTCTTTCAGCAATTGATATCAGGAGTCAGTTACTGTCATTCAATGCAAATCTGTCATAGAGATCTGAAGCTTGAAAACACACTCTTAGATGGAAGCACTGCGCCTAGAGTCAAAATTTGTGACTTTGGTTACTCAAAGTCATCTGTATTTCATTCACAACCGAAGTCTACGGTAGGAACTCCGGCTTACATTGCACCCGAGGTCCTGACAAGGAAAGAATATGATGGGAAGATTGCAGATGTTTGGTCATGTGGAGTCACCTTGTATGTGATGTTATTTGGGGCTTATCCTTTTGAAGACCCAGAGGATCCAAAAGACTTCAGTAAAACCATTGGTAGAATACTTAGTGTCCAGTACTCAATCCCGGATTATGTACGAGTCGCCATGGAATGTAGACATCTTCTATCACAAATATTTGTGGCTAATCCTGAAAAGAGAATATCAGTACCAGAAATTAGAAACCATCCATGGTTTTTGAGGAACTTGCCTATAGAATTATTGGAAGGTGGAAACTTGGAAAGCAATGATATAAATAATCCATCACAAAGTGTTGAAGAAGTCCTGTCCATTATAGAAGAGGCAAGAAAGTCTCTAAGCATTCCAAAGGTTGGTGGTCTTTTAACAGAAGGTAGCATGGACTTGGATGACTTAGATGCTGATGTAGATCTTGAAGATATAGAAACAAGTGGTGATTTTGTGTGCCATTCTCTTTAA 1020 0.4 MDRYEILKDIGSGSFAVAKLVRDNFTKELFAVKFIERGHKIDEHVQREIMNHRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERISNAGRFTEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVFHSQPKSTVGTPAYIAPEVLTRKEYDGKIADVWSCGVTLYVMLFGAYPFEDPEDPKDFSKTIGRILSVQYSIPDYVRVAMECRHLLSQIFVANPEKRISVPEIRNHPWFLRNLPIELLEGGNLESNDINNPSQSVEEVLSIIEEARKSLSIPKVGGLLTEGSMDLDDLDADVDLEDIETSGDFVCHSL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1161 339 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Lal18g1161 339 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1161 339 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1161 339 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 2 333 - -
Lal18g1161 339 Gene3D Transferase(Phosphotransferase) domain 1 80 266 - -
Lal18g1161 339 PANTHER SERINE/THREONINE KINASE 2 333 - -
Lal18g1161 339 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lal18g1161 339 CDD STKc_SnRK2 3 259 - -
Lal18g1161 339 SUPERFAMILY Protein kinase-like (PK-like) 1 268 IPR011009 -
Lal18g1161 339 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Lal18g1161 339 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1161 Lal-Chr18 14486248 14489638 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1161 3 279 CBL-interacting serine-threonine protein kinases AT4G24400 41.404 3.67e-69 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lal18g1161 Pkinase 8.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1161 K14498 - gmx:100798091 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1161 18 14486248 14489638 Lal18g1161 18 14486248 14489638 ECH