Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1143 ATGTCGTCAACGGGTCATCAAGGTGATGAAACTATTGTAACAAAAGAGATGGATGAGAGAAGTTTGTCAATTTCACATGGGCAGGAACCATATGTGCACAGAGTGGGAGTTCCTCCAAGACAAAACCTGTTCAAGGAATTCCAAGCCACTGTAAAAGAAACATTCTTCTCCGATGATCCTCTACACTCGTTCAAGGATCAAACTAAGTCCCGGAAGTTCATCCTAGGCGTTGAAGCCATATTTCCCATACTTAGTTGGGGGAGAAATTATACTCTTAGAAATTTTAGAGGAGACCTTATAGCTGGTCTAACTATTGCAAGTCTCTGCATTCCTCAGGACATTGGATATGCAAAGCTTGCAAATTTGGATCCACAGTATGGACTGTACTCCAGCTTTGTCCCACCACTGATTTATGCTGTCATGGGTAGTTCTCGTGATATTGCAATTGGACCAGTGGCAGTGGTTTCTCTCTTGTTGGGAACTTTACTTCAGAATGAGATTGATCCTATTGCAAATCCAACAGATTATAGGCGACTTGCTTTTACCGCGACCTTTTTCGCTGGGATTACTCAAGCAACTCTTGGAGTTTTTAGGTTAGGATTTTTGATTGACTTCCTATCCCATGCTGCAATTGTTGGTTTTATGGGTGGAGCTGCTATCACAATTGCCCTTCAACAACTTAAGGGATTCCTCGGGATTAAAAAGTTCACAAAGAAAACTGATGTTATCTCTGTGATGCAATCAGTATTTTCATCGGCCCAACACGGATGGAACTGGCAAACTATAGTAATTGGAGCTAGCTTTCTGATTTTTCTTTTGGTTGCCAGACAAATTGGGAAAAAGAACAAGAAATTCTTCTGGGTGCCAGCGGTCGCCCCATTGATATCAGTTGTACTCTCCACTTTTTTTGTATACATAACCCGTGCAGACAAGGAAGGTGTTGCAATCGTAAAACACATCGAGAAAGGGATCAATCCTTCTTCCGTGAAAGAAATTTATTGGAGCGGCGATTACCTTGGCAAAGGTTTTAGAATCGGCATTGTGGCTGGCATGATAGCATTGACTGAAGCCATAGCAATTGGAAGAACATTTGCTTCTATGAAGGACTATCAACTCAATGGAAACAAAGAAATGGTGGCATTAGGAGCTATGAATGTTGTTGGTTCATTGACTTCCTGCTATGTAGCAACTGGCTCATTCTCCCGATCCGCAGTAAATTTCATGGCCGGTTGTGAAACAGCAGTGTCAAATATTGTCATGTCCATTGTTGTGTTATTAACCCTGCAATTCATCACCCCTCTTTTCAAGTACACTCCAAATGCTATTCTTGCCGCTATCATCATTTCCGCTGTCATCAATCTTGTAGACTACCAGGCAGCAATTTTGATATGGAAGATTGATAAATTTGACTTCGTTGCTTGCATGGGAGCATTTTTTGGCGTTGTTTTTGCATCGGTTGAGATTGGACTTCTAATAGCTGTCTCTATATCCTTTGCAAAGATCCTATTACAAGTGACAAGGCCGCGAACTGCTATTCTCGGGAAGATACCTAGAACAACTGTCTATAGAAACATTCAACAGTATCCAGAAGCCACTAAGGTTCCTGGTGTACTGATTATAAGAGTTGATTCTGCAATATACTTTTCCAACTCCAATTATGTTAAAGAAAGGATATTAAGATGGTTGATGGATGAGGAAGAACAAATAAAAGGAGACTATCAAACAAGAATCCAATTTTTGATAGTCGAAATGTCACCCGTTACTGACATCGATACCAGTGGCATCCATGCACTTGAAGAATTATATAGAAGTCTCCAAAAGAGAGATATTCAGCTTGTTCTGGCAAATCCTGGTCCAGTAGTGATAGACAAGCTTCACACATCAAACTTTGCTAATATGCTTGGTGAAGACAAGATCTTCCTCACTGTTGCTGAGGCTGTTGCATACTGTTCTCCAAAACTGGCTGAAGACCCATGA 1977 0.4102 MSSTGHQGDETIVTKEMDERSLSISHGQEPYVHRVGVPPRQNLFKEFQATVKETFFSDDPLHSFKDQTKSRKFILGVEAIFPILSWGRNYTLRNFRGDLIAGLTIASLCIPQDIGYAKLANLDPQYGLYSSFVPPLIYAVMGSSRDIAIGPVAVVSLLLGTLLQNEIDPIANPTDYRRLAFTATFFAGITQATLGVFRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKKFTKKTDVISVMQSVFSSAQHGWNWQTIVIGASFLIFLLVARQIGKKNKKFFWVPAVAPLISVVLSTFFVYITRADKEGVAIVKHIEKGINPSSVKEIYWSGDYLGKGFRIGIVAGMIALTEAIAIGRTFASMKDYQLNGNKEMVALGAMNVVGSLTSCYVATGSFSRSAVNFMAGCETAVSNIVMSIVVLLTLQFITPLFKYTPNAILAAIIISAVINLVDYQAAILIWKIDKFDFVACMGAFFGVVFASVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTTVYRNIQQYPEATKVPGVLIIRVDSAIYFSNSNYVKERILRWLMDEEEQIKGDYQTRIQFLIVEMSPVTDIDTSGIHALEELYRSLQKRDIQLVLANPGPVVIDKLHTSNFANMLGEDKIFLTVAEAVAYCSPKLAEDP 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1143 658 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Lal18g1143 658 PANTHER SULFATE TRANSPORTER 15 658 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal18g1143 658 MobiDBLite consensus disorder prediction 1 20 - -
Lal18g1143 658 Pfam STAS domain 528 646 IPR002645 -
Lal18g1143 658 TIGRFAM sulP: sulfate permease 82 646 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal18g1143 658 SUPERFAMILY SpoIIaa-like 529 651 IPR036513 -
Lal18g1143 658 Pfam Sulfate permease family 95 475 IPR011547 GO:0016021
Lal18g1143 658 Gene3D STAS domain 507 654 IPR036513 -
Lal18g1143 658 PANTHER HIGH AFFINITY SULFATE TRANSPORTER TYPE 1 15 658 - -
Lal18g1143 658 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
Lal18g1143 658 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1143 Lal-Chr18 14353709 14358498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1143 1 657 Inorganic Solute Cotransporters AT1G22150 77.169 0.0 1017
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1143 K17470 - gmx:100797668 1160.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1143 18 14353709 14358498 Lal18g1143 18 14353709 14358498 ECH
Lal18g1143 18 14353709 14358498 Lal6g0490 6 3133947 3137592 LSH
Lal18g1143 18 14353709 14358498 Lal17g0431 17 2911130 2917215 PCT
Lal17g0431 17 2911130 2917215 Lal18g1143 18 14353709 14358498 PCT