Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1130 ATGGAGAATGAGGACCAAAATAGTGGTGGTAGATTGAGCATGATTCGTAAGATGAAGCCTTACCTTGCTATGGTATTCCTTCAGTTTGGTTATGCTGGAATGTATATCATTACCATGGTTTCATTCAAGCATGGTTTGAGTCATTGGGTACTCTCAGTTTATCGTCACATAGTTGCTACTCTCATCATGGCTCCTTTTGCCCTTGTCCTAGAAAGAAAAGTAAGGCCAAAGATGACACTACCAATCTTCCTGAGATTAGCAGTGCTTGGTTTCCTTGAGCCAGTGCTTGATCAGAATTTGTACAACATGGGGATGAAGTACACCTCAACGACGTTTGCATCAGCCACCATTAATGTCCTTCCAGCAATTACATTTATAATGGCACTCGTTTTCAGGTTAGAGAAAGTGAACTTGAAAAAAATACACAGCCTAGCGAAGGTAATTGGAACCGCAGTTACAGTATCAGGAGCCATGGTTATGACTTTATACAAAGGCCCTGAGCTTCAGATCATAAAAGGACAAGGTGGTAGCCAACATCATAGTTCCAGCACCGATGCCTCTAACCAACACTGGGTTCTTGGAACACTAATGCTCATTGCAAGTTGTGGTGGTTGGGCTAGTTTCTTTATATTGCAATCTTTCACTTTGAAGTTGTACCCAGCAGAACTCTCCATGACATCTTGGATTTGCTTTCTGGGTATTTTTGAGGGTGCAATTGCAGCACTTATCTTTGAACGTGACATGAGCGTGTGGTCCATAGGATGGGACTCAAGGCTTCTAGCTTGTGTTTATTCTGGAGTGGTGTGTTCCGGAATGGCATACTATATACAAGGAGTAGTAACGAGAGAACGTGGACCAGTATTTGTAACTTCTTTCAGCCCATTATGCATGATTATCACGGCTGCATTGGGTTCCATTATCTTAGCTGAGCAAATTCATCTAGGAAGCATAATTGGAGCTATTATAATTGTGACCGGGCTTTACACTGTGGTATGGGGAAAAAGCAAGGACAGTGTGAACACAACGGGTTCAGGGAAAGACAAAGAATTGCCAATAAAGGATGAAACAATATCAGGATCAAACATTTTTGACAGCATAGAGGTCAATGTCCCTGTTCAGGTTAAAGGAGAAGGGAAGAGTGTCCTACATGCCACAAGATCTTAG 1164 0.4218 MENEDQNSGGRLSMIRKMKPYLAMVFLQFGYAGMYIITMVSFKHGLSHWVLSVYRHIVATLIMAPFALVLERKVRPKMTLPIFLRLAVLGFLEPVLDQNLYNMGMKYTSTTFASATINVLPAITFIMALVFRLEKVNLKKIHSLAKVIGTAVTVSGAMVMTLYKGPELQIIKGQGGSQHHSSSTDASNQHWVLGTLMLIASCGGWASFFILQSFTLKLYPAELSMTSWICFLGIFEGAIAALIFERDMSVWSIGWDSRLLACVYSGVVCSGMAYYIQGVVTRERGPVFVTSFSPLCMIITAALGSIILAEQIHLGSIIGAIIIVTGLYTVVWGKSKDSVNTTGSGKDKELPIKDETISGSNIFDSIEVNVPVQVKGEGKSVLHATRS 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1130 387 PANTHER WAT1-RELATED PROTEIN 14 350 - -
Lal18g1130 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 256 335 - -
Lal18g1130 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 164 - -
Lal18g1130 387 Pfam EamA-like transporter family 32 152 IPR000620 GO:0016020|GO:0016021
Lal18g1130 387 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020|GO:0016021
Lal18g1130 387 PANTHER WAT1-RELATED PROTEIN 14 350 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1130 Lal-Chr18 14244966 14250532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1130 15 354 Nodulin-like Gene Family AT1G44800 63.557 6.64e-164 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1130 - - gmx:100814921 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1130 18 14244966 14250532 Lal18g1130 18 14244966 14250532 ECH
Lal18g1130 18 14244966 14250532 Lal6g0520 6 3326308 3329427 LSH