Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1128 ATGAACAATTCTCCTCAGATAAACGACGCCGTAACGAAGCTCAGTCCCTCTCACCTTGCCACACCAAAGCGCCTAAAGGGAGAGGAAAATTCATGTGCGGGCGAGAACAACAAGAGGAGAAAGTCCAATGGAAAAGCCACTCCACGAAGAAAAGGTTCCAAGAATTGCACCCCGAATAAAAATGTATCATCGGCTAATGGGATCGCTTCGCCTGATTCAGTTCAGAAGATTGATTTGCGGTTGGAGGCGAAACTATCAGCTGAGTTTCACTGTGGCCTAATATTCTTTAATGTGCTTTCTATCCCTTCTTTTGAGCCAGGAAAATTCAAGGATTCAGTGAAGAAATCTCAGAAGCTAGCTGATTCGGAGCGCAGTTTATGCACAGTGAAAAGGGAGGATAAAAGGATCACCAGTGGTCCTATTCATGTATTTGAAAGTTTTAAGGATGATAACATATCCCTTGACTGGAGAGACTGGACATTTCTGGGGGAGACCACTATTACAGATTGTGGTCCAGAAAGTTCAAATTCATCTATTTTGGTGGATTCTATTGAATCCTTAAATTTTGATAACCTTCGTGGTGCTTTAATTTCTGAGAACTCCTTGCCTTGTTCAGACCAACTGTCCATGATGCCAGAATACCTGGAAGAGATATTACCAGCAAATGCAACTATGCCAGCTAATGAGCAAACAATATGCCCTCAGATGCCTGAAGATTCCAAATTGGACTTGGACGTGGATGAAATTGGTACCTTTTCAGGGCAAGTTAGCATTTTCAGAAGGTCAGATGCTGAGCCACCATGTAGAGTTCAAGAAAGAACAAGGTCATACTACCATAGCTGTGAAGATAGGACTGAAGGCAGCTTATGGACTCACAAATACAAGCCAACAAAGGCTTTTGAGGTGTGTGGAAATGATGAATCTGTGAATTTCTTGCGTGACTGGTTACATCTTTGGCACGAAAGACGTTATCAAAGCAGAAAGGATTCCTCTATCAAGGATCAATGTGGCACACAAAACGATTATTTTAACTGTTCTGATAGTGACTATGATTTAGAAGATTGCAATGAGAAGGACTCCTTGCAGAATGTTCTTTTAATTACAGGCCCAATTGGAAGTGGCAAATCTGCAGCTGTCTATGCTTGTGCCCAAGAACAAGGCTTTGAGGTTTTAGAGCTCAATGCTTCAGATTGTCGGAACGGAGTCGCTGTCAAGCAGTATTTTGGAGATACTCTAGGATCACGTGGGTTCAAAAGATCATCGAAACACCAGGTGAGCACACAGCAGAAAACTTCGGAGTTTCCCCCGGGTCCAGCTTTGCCAAATTGTAAAACAACAGAGGAGATTGGTGATGGGATGATTGAAATGATGACCATATCTGATGTTGAAGCTCATAGTCCTCGGAGATTACATGGCAAAAATAATGTATTTCCATGTTATAATGCCCAAACTTTAATTCTAGTTGAGGATGTGGACATCCTTTTCCCTGAAGATCGTGGATGTATTACTGCCATACAACGCATTGCTGAAACAGCAAAAGGGCCAATTATATTGACCAGCAATAGTAATAATCCTGGCCTGCCATATAATCTTGATAGACTATCTGTTTCTTTCTCATTGCCATCGCTGGCTGAGTTGCTTTGCCATTTGTACACGGTTTGTGTTAAAGAAGGAGTCAATATCAGTCCTCTTTTCTTGCAGAAGTTTATACAATCTTGCAATCGAGATATCCGTAAAACCATTATGCATCTTCAGTTCTGGTTCCAGAGTAAAAAATATAGTAAAGACAAGATGGTGCAGACAGTGTATGGCTCACTCCCATTTGATCTTGAGGCTGGTCATCAGATTCTACCAAAGATAATACCCTGGAGTTTTCCCTCAGAGTTATCCGAACTAATTGAGAAGGAAGTTGCCAAGTCAATAACCATAATGGAAGAAAAATCTTTCTCGCAAGGGTTGGTTGAGAAAGAGTTGTACATAAATGAAAAGCAAAATGATTTAGATGTGCTATGTATGGCGCCTGATTTTCTCAATGCCGAGAAGGTAGAATTGATTGATATGAATAGATCTATTACAGATTGCAGTGAATTTGAAAGTCAATATGATGCTATTTCTCAACTGTCTAATTGTTCTGGATTACCAGTGGCATCCTCTTGGCAAATGGGACAAAGTAATTTAGTATTGATGTCCTCTAATTCCAGGGATGAGGATCCAAAGAATGGACATTCTCTGGATGTTCATGATGAAGCTTACAAGAGACAATCCTTTGAAGGCAATCGTGAATATCCTTTTAATATTCAGTTAAATCAAAGCTACAAAAACAAGCCATTTCGCAAGCTTGTTTTTTCTGGTTTGGAGGATTCAGGGCAGGAACAGTGTCAATATTTTTTAGAAACAGCTGATGATACCTTTTTAAATGAAACATGTAACTTAAAGCATGCTTTCCTAAATGATATTTTCACAGCTGATATATCCTCTGTGCCAGAATCGATATTTGTTCCTGAGTCTGCAATTGAAAATGGGATTAAGAGAATGTCTGGAACAGTGTCTTCTGGCCATCTAGCTGGTCCTGTAGAAGTTTCTCCAAATAATGAGTTGACACCATTCACTTACAGTGTAGCCAAATTGTCACAAAATTCAGATTTGTCGGTGAACACTGAAATTCCAGAATCTTCTGCAAAAACAGTTGTGCGTGGTTTTCAAGATGATAATGTGCAGGATGAGTGCAATCATGCTGGTTTTAAATTGAAATATTCGACATTTGCTGAGTCCAGTCCATCTATGGAGACAAATGTGGTACAAAATTTATGGAGGAAACTTCGTGATGGTCAAACAGATTTTAGACAGCATGCCACTTCAGAACAGCTAGGTGCTATTGAAGCTGTTAAACTTGCTAGTCGGATGAGCCGTCTAATTTCAGAATCTGATTTGTTGTTTCGTAATCATCAGCAAAAACAATGTGTAAGCGCCTTTTAA 2976 0.4005 MNNSPQINDAVTKLSPSHLATPKRLKGEENSCAGENNKRRKSNGKATPRRKGSKNCTPNKNVSSANGIASPDSVQKIDLRLEAKLSAEFHCGLIFFNVLSIPSFEPGKFKDSVKKSQKLADSERSLCTVKREDKRITSGPIHVFESFKDDNISLDWRDWTFLGETTITDCGPESSNSSILVDSIESLNFDNLRGALISENSLPCSDQLSMMPEYLEEILPANATMPANEQTICPQMPEDSKLDLDVDEIGTFSGQVSIFRRSDAEPPCRVQERTRSYYHSCEDRTEGSLWTHKYKPTKAFEVCGNDESVNFLRDWLHLWHERRYQSRKDSSIKDQCGTQNDYFNCSDSDYDLEDCNEKDSLQNVLLITGPIGSGKSAAVYACAQEQGFEVLELNASDCRNGVAVKQYFGDTLGSRGFKRSSKHQVSTQQKTSEFPPGPALPNCKTTEEIGDGMIEMMTISDVEAHSPRRLHGKNNVFPCYNAQTLILVEDVDILFPEDRGCITAIQRIAETAKGPIILTSNSNNPGLPYNLDRLSVSFSLPSLAELLCHLYTVCVKEGVNISPLFLQKFIQSCNRDIRKTIMHLQFWFQSKKYSKDKMVQTVYGSLPFDLEAGHQILPKIIPWSFPSELSELIEKEVAKSITIMEEKSFSQGLVEKELYINEKQNDLDVLCMAPDFLNAEKVELIDMNRSITDCSEFESQYDAISQLSNCSGLPVASSWQMGQSNLVLMSSNSRDEDPKNGHSLDVHDEAYKRQSFEGNREYPFNIQLNQSYKNKPFRKLVFSGLEDSGQEQCQYFLETADDTFLNETCNLKHAFLNDIFTADISSVPESIFVPESAIENGIKRMSGTVSSGHLAGPVEVSPNNELTPFTYSVAKLSQNSDLSVNTEIPESSAKTVVRGFQDDNVQDECNHAGFKLKYSTFAESSPSMETNVVQNLWRKLRDGQTDFRQHATSEQLGAIEAVKLASRMSRLISESDLLFRNHQQKQCVSAF 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1128 991 MobiDBLite consensus disorder prediction 418 435 - -
Lal18g1128 991 MobiDBLite consensus disorder prediction 1 15 - -
Lal18g1128 991 MobiDBLite consensus disorder prediction 49 69 - -
Lal18g1128 991 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 289 603 IPR027417 -
Lal18g1128 991 Gene3D - 541 604 - -
Lal18g1128 991 MobiDBLite consensus disorder prediction 1 69 - -
Lal18g1128 991 MobiDBLite consensus disorder prediction 418 442 - -
Lal18g1128 991 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 16 987 IPR004582 GO:0006281
Lal18g1128 991 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 16 987 - -
Lal18g1128 991 Gene3D - 287 537 IPR027417 -
Lal18g1128 991 CDD AAA 365 427 - -
Lal18g1128 991 MobiDBLite consensus disorder prediction 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1128 Lal-Chr18 14228786 14237624 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1128 290 586 Core DNA Replication Machinery Family AT5G22010 23.052 1.60e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1128 - - gmx:100815984 1016.53