Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1121 ATGAAAACAGCAAAGCTACAACAACATTTTCATGTGTTGGTGGTAGATGATAGTGTTATTGACAGGAAGCTTCTACAGAGGCTTCTAAGAGATTCTTCTTGCAAAGTTACCTTCATGGAATCTGGAGATAAAGCTTTGAAATATCTTGGACTTCTTGATGATATTGATAATGCTTCCTCAACTTCTTCACAACCATTTTCATTGCAAGATGGAATAAAAGTGAATTTGATCATGACAGATTACTGCATGCCAGGGATGAATGGTTATGATTTACTTAAACGAATCAAGGGATCGTCTTGGAAAGATGTACCAGTAGTGATTATGTCATCAGAAAATGTACCTACCAGAATCAGCAGGTGTTTGGAAGGAGGGGCAAAGGAGTTTCTGTTGAAGCCTCTTCAGTTATCTGATTTGGAGAAGCTTCAGCCATACTTTATGACATCCTTTGATAATTCTAGTCAACAAAAATATGCTAACAGTTCAATAGCTTCTAATAATGACACCAATAACAACAACATAAAAAACAATAGCATGACCAAATTGAAGGGTATGCCTGGTGAACATGATTTTAAGTTATGGTTACCGCTGCAATATTACGGAGCACTACCTTCTTCAGCTGCATCACAAAGTTATGGATCTAAGGAATCCACAACTTCACCTCTACTGTTAAATCTTTCACTGAAAGCAATCAAATTGAAATTCAGCTGTTGA 711 0.3671 MKTAKLQQHFHVLVVDDSVIDRKLLQRLLRDSSCKVTFMESGDKALKYLGLLDDIDNASSTSSQPFSLQDGIKVNLIMTDYCMPGMNGYDLLKRIKGSSWKDVPVVIMSSENVPTRISRCLEGGAKEFLLKPLQLSDLEKLQPYFMTSFDNSSQQKYANSSIASNNDTNNNNIKNNSMTKLKGMPGEHDFKLWLPLQYYGALPSSAASQSYGSKESTTSPLLLNLSLKAIKLKFSC 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1121 236 Pfam Response regulator receiver domain 12 140 IPR001789 GO:0000160
Lal18g1121 236 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 6 180 - -
Lal18g1121 236 SUPERFAMILY CheY-like 10 140 IPR011006 -
Lal18g1121 236 MobiDBLite consensus disorder prediction 160 180 - -
Lal18g1121 236 MobiDBLite consensus disorder prediction 160 179 - -
Lal18g1121 236 SMART REC_2 10 142 IPR001789 GO:0000160
Lal18g1121 236 PANTHER TWO-COMPONENT RESPONSE REGULATOR 6 180 IPR045279 GO:0009736
Lal18g1121 236 Gene3D - 11 171 - -
Lal18g1121 236 ProSiteProfiles Response regulatory domain profile. 11 146 IPR001789 GO:0000160
Lal18g1121 236 CDD REC_typeA_ARR 12 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1121 Lal-Chr18 14171913 14181001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1121 7 163 Response Regulator Gene Family AT2G41310 56.522 8.27e-58 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal18g1121 Response_reg 1.8e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1121 K14492 - gmx:100790440 251.906
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1121 18 14171913 14181001 Lal18g1121 18 14171913 14181001 ECH
Lal18g1121 18 14171913 14181001 Lal22g0492 22 3249310 3251787 LSH