Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1118 ATGTTTGTTTCTCCCACCATTCCTATTTCGCTTCTCCGATTCTGCTGCATTAAGCGTTTTTTTGTTGACTCTCTAAAAATGTGTTTACAAGTGAATGAGCTTAGAGAAAACTTTACTTCGGGCAAAACCAGAAGTTATGCATGGAGAGTGTCACAGTTGAATGCACTCTCTAACCTCATCGACGATCACGAACAAGAGATTGTTCATGCTCTTCACTCTGACCTCTCTAAACCACCACTCGAAACCGTCGCATATGAGATTGCTTTGTTGAAAAACTCATGTGAAGTTTCACTGAAGGAATTGAAACGTTGGATGATTCCAGAGAAGGTCAAAACTTCAATTGCAACTTTTCCCTCTTCAGCTGAGATAGTATCTGAACCACTGGGAGTTGTGTTAGTCATCTCTGCATGGAACTATCCATTTTTGTTGTCACTTGATCCAGTCATTGGAGCCATTGCAGCCGGTAATGCTGTGGTTCTAAAACCATCAGAAATTGCTCCAGCCTCGTCATCGCTGCTGGCAAAATTGCTAGGGGAGTACATGGATAACTCATCTATAAGAGTTGTTGAGGGGGCAGTTGATGAAACATCTGCATTACTGCAGCAGAAGTGGGACAAGATTTTCTATACAGGTAATGGAAGAGTAGGACGCATAGTGTTGGCTGCTGCTGCAAAACACCTTACACCAGTTGTGGAGCTTGGAGGAAAATCTCCAGTTATTGTTGATTCAAATATCAACTTAGAAGTTGCAACTCGACGTATAATAGCAGGAAAGTGGGGTTGTAACAGCGGACAAGCTTGTGTTTCTCCAGATTATATTATAACAACAAAAGACTATGCTCCCAAGTTGGTGGATGCCCTGAAGTATGAATTAGAGAAATTTTACAGAAAGAACCCATTGGAATCGAAAGATTTGTCGCGTATTGTGAACTCGAACCACTTCGCTCGCTTGACAAAGCTCATGGATGATGATAAGGTTTCTGGTAAGATTGTTTGTGGAGGTGAAAAGGATGAAAACAAATTGAGGATTGCTCCCACTGTTCTGTTGGATGTCCCGCGAGATTCTCTGATAATGACCGATGAGATATTTGGTCCTTTACTTCCAATCATCACGGTTGATAAAGTGGAAGAAAGCTTTGATCTTGCAGTTCATACTTTACCATTTGGTGGAATTGGGGAGAGTGGAGTGGGTGCATATCATGGGAAAGTCTCATTTGATGCATTCAGCCACAAAAAAGCAGTTCTTTATCGCAGTTTTATTGGTGATGCATCAATAAGGTACCCACCATACACAAACACAAGTATGAGATTGCTTAAGGCTCTTCTTGGTGATGGCATACTTGGTGTAATCCGTGTTGTTCTTGGATGGTCATAG 1374 0.417 MFVSPTIPISLLRFCCIKRFFVDSLKMCLQVNELRENFTSGKTRSYAWRVSQLNALSNLIDDHEQEIVHALHSDLSKPPLETVAYEIALLKNSCEVSLKELKRWMIPEKVKTSIATFPSSAEIVSEPLGVVLVISAWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPASSSLLAKLLGEYMDNSSIRVVEGAVDETSALLQQKWDKIFYTGNGRVGRIVLAAAAKHLTPVVELGGKSPVIVDSNINLEVATRRIIAGKWGCNSGQACVSPDYIITTKDYAPKLVDALKYELEKFYRKNPLESKDLSRIVNSNHFARLTKLMDDDKVSGKIVCGGEKDENKLRIAPTVLLDVPRDSLIMTDEIFGPLLPIITVDKVEESFDLAVHTLPFGGIGESGVGAYHGKVSFDAFSHKKAVLYRSFIGDASIRYPPYTNTSMRLLKALLGDGILGVIRVVLGWS 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1118 457 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 35 234 IPR016162 GO:0016491
Lal18g1118 457 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 395 412 IPR016162 GO:0016491
Lal18g1118 457 Pfam Aldehyde dehydrogenase family 38 382 IPR015590 GO:0016491
Lal18g1118 457 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 231 238 IPR029510 GO:0016491
Lal18g1118 457 SUPERFAMILY ALDH-like 32 429 IPR016161 GO:0016491
Lal18g1118 457 PIRSF ALDH 17 383 IPR012394 GO:0006081
Lal18g1118 457 PIRSF ALDH 378 450 IPR012394 GO:0006081
Lal18g1118 457 PANTHER ALDEHYDE DEHYDROGENASE 18 381 - -
Lal18g1118 457 PANTHER ALDEHYDE DEHYDROGENASE 381 457 - -
Lal18g1118 457 PANTHER ALDEHYDE DEHYDROGENASE 381 457 IPR012394 GO:0006081
Lal18g1118 457 PANTHER ALDEHYDE DEHYDROGENASE 18 381 IPR012394 GO:0006081
Lal18g1118 457 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 235 381 IPR016163 GO:0016620
Lal18g1118 457 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 382 394 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1118 Lal-Chr18 14149796 14155209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1118 87 455 Aldehyde Dehydrogenase Gene Family AT1G44170 66.423 0.0 566
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1118 18 14149796 14155209 Lal18g1118 18 14149796 14155209 ECH